RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 DDX3XO00571 662 aaKnown RBP eCLIP17.33■□□□□ 0.36
NUP50-218ENST00000493456 CEACAM4O75871 244 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 JCHAINP01591 159 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 PRKCIP41743 596 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 HALP42357 657 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 MMRN1Q13201 1228 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 EIF2S3LQ2VIR3 472 aaKnown RBP17.33■□□□□ 0.36
NUP50-218ENST00000493456 CCDC183Q5T5S1 534 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 IZUMO3Q5VZ72 239 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 ALS2CLQ60I27 953 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 ZNF787Q6DD87 383 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 FAM199XQ6PEV8 388 aaPredicted RBP17.33■□□□□ 0.36
NUP50-218ENST00000493456 GPR26Q8NDV2 337 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 EID2BQ96D98 161 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 NUP85Q9BW27 656 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 ISCUQ9H1K1 167 aa17.33■□□□□ 0.36
NUP50-218ENST00000493456 AKIRIN1Q9H9L7 192 aaPredicted RBP17.33■□□□□ 0.36
NUP50-218ENST00000493456 FARSAQ9Y285 508 aaKnown RBP17.33■□□□□ 0.36
NUP50-218ENST00000493456 HIVEP3Q5T1R4 2406 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 SSU72P8A0A1W2PR75 194 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 MX2P20592 715 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 DCTP40126 519 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 CD86P42081 329 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 PPP1CAP62136 330 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 MRPL49Q13405 166 aaKnown RBP17.32■□□□□ 0.36
NUP50-218ENST00000493456 ZNF547Q8IVP9 402 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 RHOT1Q8IXI2 618 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 Q8NA96 180 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 PRR7Q8TB68 274 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 PNPLA2Q96AD5 504 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 CD180Q99467 661 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 FGF21Q9NSA1 209 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 DTLQ9NZJ0 730 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 AIPL1Q9NZN9 384 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 IP6K2Q9UHH9 426 aa17.32■□□□□ 0.36
NUP50-218ENST00000493456 WIPF3A6NGB9 483 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 TLCD2A6NGC4 264 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 CDK14O94921 469 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 MMP2P08253 660 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 CD48P09326 243 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 EBLN1P0CF75 366 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 FECHP22830 423 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 PTGIRP43119 386 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 ARL4DP49703 201 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 DRG2P55039 364 aaKnown RBP17.31■□□□□ 0.36
NUP50-218ENST00000493456 TUBB4BP68371 445 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 KLHL30Q0D2K2 578 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 TUBB2AQ13885 445 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 KCNAB1Q14722 419 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 PRR30Q53SZ7 412 aaPredicted RBP17.31■□□□□ 0.36
NUP50-218ENST00000493456 ZNF517Q6ZMY9 492 aaPredicted RBP17.31■□□□□ 0.36
NUP50-218ENST00000493456 TICAM1Q8IUC6 712 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 OR8K5Q8NH50 307 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 ADAMTS17Q8TE56 1095 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 HDAC11Q96DB2 347 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 ZNF670Q9BS34 389 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 TUBB2BQ9BVA1 445 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 MAP10Q9P2G4 905 aa17.31■□□□□ 0.36
NUP50-218ENST00000493456 KCNJ13O60928 360 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 SCRG1O75711 98 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 CLDN1O95832 211 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 GSDMDP57764 484 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 HSD11B2P80365 405 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 GTF2H3Q13889 308 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 DPYSL3Q14195 570 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 GALNT3Q14435 633 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 HADHQ16836 314 aaKnown RBP17.3■□□□□ 0.36
NUP50-218ENST00000493456 SLC6A19Q695T7 634 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 RBM43Q6ZSC3 357 aaKnown RBP17.3■□□□□ 0.36
NUP50-218ENST00000493456 TMC3Q7Z5M5 1100 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 C11orf96Q7Z7L8 435 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 TRAPPC5Q8IUR0 188 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 TMEM126BQ8IUX1 230 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 D2HGDHQ8N465 521 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 MR1Q95460 341 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 VPS35Q96QK1 796 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 XPO4Q9C0E2 1151 aaKnown RBP17.3■□□□□ 0.36
NUP50-218ENST00000493456 MAGEE1Q9HCI5 957 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 ANO10Q9NW15 660 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 ANAPC7Q9UJX3 599 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 CACNA1DQ01668 2161 aa17.3■□□□□ 0.36
NUP50-218ENST00000493456 UBA6A0AVT1 1052 aaPredicted RBP17.29■□□□□ 0.36
NUP50-218ENST00000493456 MTX2O75431 263 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 TMEM63AO94886 807 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 LDLRP01130 860 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 KLK3P07288 261 aaPredicted RBP17.29■□□□□ 0.36
NUP50-218ENST00000493456 RAB40ALP0C0E4 278 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 COL8A1P27658 744 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 ARSEP51690 589 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 PLCL1Q15111 1095 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 DNTTIP2Q5QJE6 756 aaKnown RBP17.29■□□□□ 0.36
NUP50-218ENST00000493456 E4F1Q66K89 784 aaPredicted RBP17.29■□□□□ 0.36
NUP50-218ENST00000493456 CARFQ8N187 725 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 TMEM102Q8N9M5 508 aaPredicted RBP17.29■□□□□ 0.36
NUP50-218ENST00000493456 FDCSPQ8NFU4 85 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 LRFN5Q96NI6 719 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 MAP3K3Q99759 626 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 LATS2Q9NRM7 1088 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 LUZP4Q9P127 313 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms