RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SPAG6O75602 509 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 NDUFA10O95299 355 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 TPM2P07951 284 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 FGF5P12034 268 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 ATP1A3P13637 1013 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 EDN3P14138 238 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 FERP16591 822 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 TYRP1P17643 537 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 XRCC1P18887 633 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 ARL4AP40617 200 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 GARSP41250 739 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 CLCNKAP51800 687 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 IL11RAQ14626 422 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 HENMT1Q5T8I9 393 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 TMEM26Q6ZUK4 368 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 KCNMB4Q86W47 210 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 RASGRP3Q8IV61 690 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 RAVER1Q8IY67 606 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 CT55Q8WUE5 264 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 NSMCE1Q8WV22 266 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 CHTF18Q8WVB6 975 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 STAMBPL1Q96FJ0 436 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 ELMO2Q96JJ3 720 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 TGM7Q96PF1 710 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 FOXC2Q99958 501 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 RMI1Q9H9A7 625 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 CHKBQ9Y259 395 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 NTNG1Q9Y2I2 539 aa11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-228ENST00000492150 ARGFXA6NJG6 315 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 LGALS16A8MUM7 142 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 NUAK1O60285 661 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 UBXN7O94888 489 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 PCK1P35558 622 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 SLC19A1P41440 591 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 SPINT3P49223 89 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 EPHB1P54762 984 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 DSC2Q02487 901 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 UBXN1Q04323 297 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 TLE4Q04727 773 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 ITKQ08881 620 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 TXNRD3NBQ6F5E7 133 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 ALG1LQ6GMV1 187 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 PPP1R2P3Q6NXS1 205 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 BIVMQ86UB2 503 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 AOPEPQ8N6M6 819 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 AVL9Q8NBF6 648 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 RUFY1Q96T51 708 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 POLR1EQ9GZS1 481 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 NUP62CLQ9H1M0 184 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 CARD9Q9H257 536 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 ACTL8Q9H568 366 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 AKIRIN1Q9H9L7 192 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 ARFGAP3Q9NP61 516 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 KLC4Q9NSK0 619 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 GPR83Q9NYM4 423 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 ZNF624Q9P2J8 865 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 ATXN10Q9UBB4 475 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 LIMA1Q9UHB6 759 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 LNPEPQ9UIQ6 1025 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 PADI1Q9ULC6 663 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 NEU2Q9Y3R4 380 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 PCDHGA10Q9Y5H3 936 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 ADGRG1Q9Y653 693 aa11.49□□□□□ -0.57
CACNA1C-228ENST00000492150 LRRC10BA6NIK2 292 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 TIAF1O95411 115 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 CCDC172P0C7W6 258 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 CCNYL3P0C7X3 344 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 RARAP10276 462 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 ZNF8P17098 575 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 AMD1P17707 334 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 BOLA3Q53S33 107 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 ZNF648Q5T619 568 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 RPTNQ6XPR3 784 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 APTXQ7Z2E3 356 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 PRSS42Q7Z5A4 293 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 SYVN1Q86TM6 617 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 PHYKPLQ8IUZ5 450 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 PARP9Q8IXQ6 854 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 ARRDC2Q8TBH0 407 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 KLHL6Q8WZ60 621 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 HSPH1Q92598 858 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 RSC1A1Q92681 617 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 LYSMD1Q96S90 227 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 TDRD1Q9BXT4 1180 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 GPR87Q9BY21 358 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 OR2AG1Q9H205 316 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 FAM83DQ9H4H8 585 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 PCDH18Q9HCL0 1135 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 DTLQ9NZJ0 730 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 SLC23A2Q9UGH3 650 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 DNPEPQ9ULA0 475 aa11.48□□□□□ -0.57
CACNA1C-228ENST00000492150 NCOA6Q14686 2063 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 C1orf232A0A0U1RR37 186 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 RASSF9O75901 435 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms