RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 NMBRP28336 390 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PBLDP30039 288 aaPredicted RBP16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 BIRC2Q13490 618 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 DBN1Q16643 649 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 BCL7AQ4VC05 210 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 FNBP1LQ5T0N5 605 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 LYPLAL1Q5VWZ2 237 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 IZUMO3Q5VZ72 239 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 AMZ2Q86W34 360 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SFRP1Q8N474 314 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SPATA4Q8NEY3 305 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 OR6P1Q8NGX9 317 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 OR4L1Q8NH43 312 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 WDR48Q8TAF3 677 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SGF29Q96ES7 293 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 SGSM3Q96HU1 749 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 KRT12Q99456 494 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 TRIM51Q9BSJ1 452 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PRDM8Q9NQV8 689 aa16.02■□□□□ 0.16
MSH5-SAPCD1-206ENST00000491552 PTPRBP23467 1997 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TTI1O43156 1089 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SGTAO43765 313 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MT-CO3P00414 261 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 JUPP14923 745 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 IDSP22304 550 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 PRLHRP49683 370 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 DMPKQ09013 629 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ITIH4Q14624 930 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 FASTKD1Q53R41 847 aaKnown RBP16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CDCP2Q5VXM1 449 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CASC4Q6P4E1 433 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 IYDQ6PHW0 289 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 HOOK3Q86VS8 718 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CCNJLQ8IV13 435 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MPP5Q8N3R9 675 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 BEND7Q8N7W2 519 aaPredicted RBP16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SLC37A2Q8TED4 501 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 NAT14Q8WUY8 206 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TTC1Q99614 292 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SYNDIG1Q9H7V2 258 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SAMD15Q9P1V8 674 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CLCA2Q9UQC9 943 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MSRB2Q9Y3D2 182 aa16.01■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TRBV23OR9-2A0A075B6M9 112 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 KIR2DS5A0A0G2JLQ3 304 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 A0A0G2JNG1 304 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 FAM149AA5PLN7 773 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 KLHL33A6NCF5 533 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SDR42E2A6NKP2 422 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 OR5K4A6NMS3 321 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 PDZK1P1A8MUH7 402 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 KIR2DS3K7RE56 304 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 IVDP26440 423 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MAGEA3P43357 314 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 FASLGP48023 281 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CCL7P80098 99 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 C2orf54Q08AI8 447 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 KIR2DS5Q14953 304 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 NR1D2Q14995 579 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SEPT7Q16181 437 aaKnown RBP16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 AARS2Q5JTZ9 985 aaKnown RBP16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CES3Q6UWW8 571 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 PACS1Q6VY07 963 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CERS6Q6ZMG9 384 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ZNF438Q7Z4V0 828 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SPRED1Q7Z699 444 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SLC9B2Q86UD5 537 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MARCH9Q86YJ5 346 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CACTIN-AS1Q8N1I8 211 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 Q8N9G6 341 aaPredicted RBP16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MFSD3Q96ES6 412 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 LINC00615Q96LM1 132 aaPredicted RBP16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 STN1Q9H668 368 aaKnown RBP16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CATSPERZQ9NTU4 200 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 BPTFQ12830 3046 aa16■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MGAT4DA6NG13 374 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 NTN3O00634 580 aaPredicted RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 PPM1DO15297 605 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TCEA3O75764 348 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 AP2A2O94973 939 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TUBB4AP04350 444 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 RPLP0P05388 317 aaKnown RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 PAMP19021 973 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 RPL10P27635 214 aaKnown RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 PPARGP37231 505 aaPredicted RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 NSG1P42857 185 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 DRG2P55039 364 aaKnown RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 HHEXQ03014 270 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CKAP4Q07065 602 aaKnown RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SPIDRQ14159 915 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 NFE2L1Q14494 772 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 AGAP9Q5VTM2 703 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 WASH2PQ6VEQ5 465 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 RBM44Q6ZP01 1051 aaKnown RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 FAM83HQ6ZRV2 1179 aaPredicted RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ZNF572Q7Z3I7 529 aaPredicted RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 DCBLD1Q8N8Z6 715 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 AVL9Q8NBF6 648 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms