RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 CHORDC1Q9UHD1 332 aaPredicted RBP5.46□□□□□ -1.54
VPS26A-206ENST00000489794 RABGAP1Q9Y3P9 1069 aa5.46□□□□□ -1.54
VPS26A-206ENST00000489794 TTLL3Q9Y4R7 772 aa5.46□□□□□ -1.54
VPS26A-206ENST00000489794 PRAG1Q86YV5 1406 aa5.46□□□□□ -1.54
VPS26A-206ENST00000489794 SYNDIG1LA6NDD5 238 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 TULP2O00295 520 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 LDB3O75112 727 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 KRT36O76013 467 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 BEST1O76090 585 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 KCNK5O95279 499 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 HSP90AA1P07900 732 aaKnown RBP5.45□□□□□ -1.54
VPS26A-206ENST00000489794 HLA-DOBP13765 273 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 ITGA2P17301 1181 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 DGKAP23743 735 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 NR2F2P24468 414 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 AHRP35869 848 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 NNMTP40261 264 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 STAT2P52630 851 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 COG7P83436 770 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 KRT33BQ14525 404 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 DHRS7BQ6IAN0 325 aaPredicted RBP5.45□□□□□ -1.54
VPS26A-206ENST00000489794 Q75L30 129 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 INTS8Q75QN2 995 aaKnown RBP5.45□□□□□ -1.54
VPS26A-206ENST00000489794 ZNF534Q76KX8 674 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 TMPRSS12Q86WS5 348 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 C1orf52Q8N6N3 182 aaKnown RBP5.45□□□□□ -1.54
VPS26A-206ENST00000489794 POC1AQ8NBT0 407 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 SLC44A1Q8WWI5 657 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 PHF21AQ96BD5 680 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 ABHD8Q96I13 439 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 DDOQ99489 341 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 TERF2IPQ9NYB0 399 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 WSB2Q9NYS7 404 aaPredicted RBP5.45□□□□□ -1.54
VPS26A-206ENST00000489794 MORF4L1Q9UBU8 362 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 RPS6KA6Q9UK32 745 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 PCDHGB4Q9UN71 923 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 OR2W1Q9Y3N9 320 aa5.45□□□□□ -1.54
VPS26A-206ENST00000489794 GLOD5A6NK44 160 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 PRAC2D3DTV9 90 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 DVL1O14640 695 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 PLPP2O43688 288 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 AHCYL1O43865 530 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 RSL1D1O76021 490 aaKnown RBP5.44□□□□□ -1.54
VPS26A-206ENST00000489794 CSPG5O95196 566 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 TPOP07202 933 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 SELLP14151 372 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 HOXA1P49639 335 aaPredicted RBP5.44□□□□□ -1.54
VPS26A-206ENST00000489794 ISL1P61371 349 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 SIRPAP78324 504 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 CALD1Q05682 793 aaKnown RBP5.44□□□□□ -1.54
VPS26A-206ENST00000489794 BAATQ14032 418 aaPredicted RBP5.44□□□□□ -1.54
VPS26A-206ENST00000489794 PCLAFQ15004 111 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 CCDC96Q2M329 555 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 RAB6CQ53S08 254 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 OR7E24Q6IFN5 339 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 CLEC17AQ6ZS10 378 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 C18orf65Q6ZTR6 163 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 CEP97Q8IW35 865 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 BBS10Q8TAM1 723 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 SMC6Q96SB8 1091 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 PCYT2Q99447 389 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 GFI1Q99684 422 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 SPATC1LQ9H0A9 340 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 RAB6CQ9H0N0 254 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 TMX4Q9H1E5 349 aaPredicted RBP5.44□□□□□ -1.54
VPS26A-206ENST00000489794 MMP27Q9H306 513 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 ZNF556Q9HAH1 456 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 ABCF3Q9NUQ8 709 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 MARCH4Q9P2E8 410 aaPredicted RBP5.44□□□□□ -1.54
VPS26A-206ENST00000489794 ZNF148Q9UQR1 794 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 YIPF1Q9Y548 306 aa5.44□□□□□ -1.54
VPS26A-206ENST00000489794 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
VPS26A-206ENST00000489794 TMEM189-UBE2V1I3L0A0 370 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 J3QR06 171 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 EIF3DO15371 548 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS26A-206ENST00000489794 ENTPD3O75355 529 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 GJB3O75712 270 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 PDE9AO76083 593 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 NR2F1P10589 423 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 AMD1P17707 334 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 GM2AP17900 193 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 ERVFC1-1P60608 527 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 UBE2V1Q13404 147 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 PDSS1Q5T2R2 415 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 RUSC1-AS1Q66K80 236 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 FOXL2NBQ6ZUU3 175 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 ATG9AQ7Z3C6 839 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 PRPF39Q86UA1 669 aaKnown RBP5.43□□□□□ -1.54
VPS26A-206ENST00000489794 KBTBD6Q86V97 674 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 GALNT13Q8IUC8 556 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 MAB21L3Q8N8X9 362 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 APPL2Q8NEU8 664 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 SLC22A18Q96BI1 424 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 HGH1Q9BTY7 390 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 CSTL1Q9H114 145 aa5.43□□□□□ -1.54
VPS26A-206ENST00000489794 DENND2DQ9H6A0 471 aaPredicted RBP5.43□□□□□ -1.54
VPS26A-206ENST00000489794 CHMP1AQ9HD42 196 aaPredicted RBP5.43□□□□□ -1.54
VPS26A-206ENST00000489794 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS26A-206ENST00000489794 TSPYL4Q9UJ04 414 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms