RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 XRCC1P18887 633 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 SDC4P31431 198 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 OTX2P32243 289 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 KCNK10P57789 538 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 ACY1Q03154 408 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 NSUN2Q08J23 767 aaKnown RBP eCLIP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 GPR19Q15760 415 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 HIF1AQ16665 826 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 TTI2Q6NXR4 508 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 ARHGAP36Q6ZRI8 547 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 MRGPREQ86SM8 312 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 TRIM48Q8IWZ4 208 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 GALNT16Q8N428 558 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF808Q8N4W9 903 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 TM9SF4Q92544 642 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 CENPIQ92674 756 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 SNX21Q969T3 373 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 NTAN1Q96AB6 310 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 CCDC120Q96HB5 630 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 WDR77Q9BQA1 342 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 RIOK2Q9BVS4 552 aaKnown RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 SLC39A8Q9C0K1 460 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 PDCL3Q9H2J4 239 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 RMND1Q9NWS8 449 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 VPS18Q9P253 973 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 APEX2Q9UBZ4 518 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 EPHA6Q9UF33 1036 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 CNOT6Q9ULM6 557 aaKnown RBP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 NEU2Q9Y3R4 380 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.99□□□□□ -0.97
SSBP1-212ENST00000489378 CSPG4Q6UVK1 2322 aa8.99□□□□□ -0.97
SSBP1-212ENST00000489378 A0A1W2PQJ5 194 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 C2CD4BA6NLJ0 364 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 PSMA7O14818 248 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 FAM155BO75949 473 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 TSFMP43897 325 aaKnown RBP8.98□□□□□ -0.97
SSBP1-212ENST00000489378 ART1P52961 327 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 TRAF2Q12933 501 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 PKP1Q13835 747 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 GPR18Q14330 331 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 DCAF10Q5QP82 559 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 TAF3Q5VWG9 929 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 LRRC66Q68CR7 880 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 STRADAQ7RTN6 431 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 SLFN11Q7Z7L1 901 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 RAB43Q86YS6 212 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 PHYKPLQ8IUZ5 450 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 DSELQ8IZU8 1212 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 EXD1Q8NHP7 514 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 FAM172AQ8WUF8 416 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 CPA5Q8WXQ8 436 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 UBXN4Q92575 508 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 HDAC11Q96DB2 347 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 SCRN2Q96FV2 425 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 FAM81BQ96LP2 452 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 LRFN5Q96NI6 719 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 MCCC1Q96RQ3 725 aaPredicted RBP8.98□□□□□ -0.97
SSBP1-212ENST00000489378 OSGEPL1Q9H4B0 414 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 CATSPERBQ9H7T0 1116 aa8.98□□□□□ -0.97
SSBP1-212ENST00000489378 DNMT3AQ9Y6K1 912 aaPredicted RBP8.98□□□□□ -0.97
SSBP1-212ENST00000489378 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 DDX3YO15523 660 aaKnown RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 GRID2O43424 1007 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SOCS5O75159 536 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 JRKO75564 520 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 IPO13O94829 963 aaKnown RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 JCHAINP01591 159 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 BRAFP15056 766 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 RORAP35398 523 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 PTPN9P43378 593 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 KIR3DL1P43629 444 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 STX17P56962 302 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 GSDMDP57764 484 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 TUBB4BP68371 445 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 TLE4Q04727 773 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 TUBB2AQ13885 445 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SEPT7Q16181 437 aaKnown RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 PTCHD3Q3KNS1 767 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 NAA35Q5VZE5 725 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF765Q7L2R6 523 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 FAM71AQ8IYT1 594 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 TTC30BQ8N4P2 665 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 AOPEPQ8N6M6 819 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 CLEC1AQ8NC01 280 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 ZNF501Q96CX3 271 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 C14orf79Q96F83 325 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 DHTKD1Q96HY7 919 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 PSKH2Q96QS6 385 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 MAP3K3Q99759 626 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 TUBB2BQ9BVA1 445 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 RAB33BQ9H082 229 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 GSX1Q9H4S2 264 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 NOD2Q9HC29 1040 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SLC40A1Q9NP59 571 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 KCND1Q9NSA2 647 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 KLC4Q9NSK0 619 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SUCOQ9UBS9 1254 aaKnown RBP8.97□□□□□ -0.97
SSBP1-212ENST00000489378 SLC23A2Q9UGH3 650 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 RTTNQ86VV8 2226 aa8.97□□□□□ -0.97
SSBP1-212ENST00000489378 AKAP6Q13023 2319 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms