RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ADPRHL2Q9NX46 363 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SNTG2Q9NY99 539 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 USE1Q9NZ43 259 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 DNAJB9Q9UBS3 223 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 LEF1Q9UJU2 399 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 EFCAB9A8MZ26 197 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 GNGT2O14610 69 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 SSX4O60224 188 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 FADS2O95864 444 aaKnown RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 CYBBP04839 570 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ALOX12P18054 663 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ITGB6P18564 788 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 IL12AP29459 219 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ADRA1BP35368 520 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 POLR2JP52435 117 aaKnown RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 MTPNP58546 118 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 GNG2P59768 71 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 MRPS15P82914 257 aaKnown RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 TMEM132BQ14DG7 1078 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 BNIPLQ7Z465 357 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 B3GNT8Q7Z7M8 397 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 HID1Q8IV36 788 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 PARP16Q8N5Y8 322 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 KIAA1958Q8N8K9 716 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 PTGR2Q8N8N7 351 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 PSD4Q8NDX1 1056 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ANKK1Q8NFD2 765 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 FBXO30Q8TB52 745 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 FBLIM1Q8WUP2 373 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 NT5C3BQ969T7 300 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 REXO5Q96IC2 774 aaKnown RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 PPP1R16BQ96T49 567 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 VAT1Q99536 393 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 TMEM246Q9BRR3 403 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ZBED2Q9BTP6 218 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 FICDQ9BVA6 458 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 C6orf62Q9GZU0 229 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 DCSTAMPQ9H295 470 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ATXN3LQ9H3M9 355 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 DUSP21Q9H596 190 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ZBTB20Q9HC78 741 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ANKHQ9HCJ1 492 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 QPCTLQ9NXS2 382 aa10.54□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF214Q9UL59 606 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 FNDC1Q4ZHG4 1894 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-208ENST00000486641 SSC5DA1L4H1 1573 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 METTL15A6NJ78 407 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PDZK1P1A8MUH7 402 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 HAT1O14929 419 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PSMD3O43242 534 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 ICMTO60725 284 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SLC22A3O75751 556 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PRKD3O94806 890 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 FTH1P02794 183 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 MT-ND2P03891 347 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 CD36P16671 472 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 LMO2P25791 158 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 GGT5P36269 586 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 TGFBR2P37173 567 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 CHRNA4P43681 627 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 HTR3AP46098 478 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 NDUFV1P49821 464 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 CLCN3P51790 818 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 CDKN2DP55273 166 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 P2RX3P56373 397 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SLC35A2P78381 396 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 ADIGQ0VDE8 80 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 TRAF3Q13114 568 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SLC14A2Q15849 920 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PNCKQ6P2M8 343 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 OR52K2Q8NGK3 314 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SEPT1Q8WYJ6 367 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 DPF3Q92784 378 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 KIF12Q96FN5 646 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 CELF6Q96J87 481 aaKnown RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 HSFY1Q96LI6 401 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PPM1MQ96MI6 270 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 KAT8Q9H7Z6 458 aaKnown RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PLSCR3Q9NRY6 295 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 COMMD8Q9NX08 183 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 FBXL12Q9NXK8 326 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 C3orf18Q9UK00 162 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PRELID1Q9Y255 219 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PCDHB14Q9Y5E9 798 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SNX10Q9Y5X0 201 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 MAU2Q9Y6X3 613 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 MN1Q10571 1320 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 MIA3Q5JRA6 1907 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 AP3D1O14617 1153 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 BCKDKO14874 412 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SLC16A6O15403 523 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 KATNA1O75449 491 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 CYP11A1P05108 521 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PAMP19021 973 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 GGT1P19440 569 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 OR2B6P58173 313 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SEMA3BQ13214 749 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 BRMS1LQ5PSV4 323 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 EFCAB12Q6NXP0 572 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms