RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 LRRC1Q9BTT6 524 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 GSDMCQ9BYG8 508 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 ACTL8Q9H568 366 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 WDCPQ9H6R7 721 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 ANKZF1Q9H8Y5 726 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 EFR3BQ9Y2G0 817 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 NTNG1Q9Y2I2 539 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 PCDHGA6Q9Y5G7 932 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 ZNF487B1APH4 448 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 FAM72CH0Y354 149 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 INPP4BO15327 924 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 LRRTM2O43300 516 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 RAD51CO43502 376 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 CST8O60676 142 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 TMCC1O94876 653 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 TJP3O95049 919 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 SNRPB2P08579 225 aaKnown RBP9.71□□□□□ -0.86
SND1-213ENST00000486037 PTGIRP43119 386 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 POLD2P49005 469 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 PPM1FP49593 454 aaPredicted RBP9.71□□□□□ -0.86
SND1-213ENST00000486037 AIF1P55008 147 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 ITGA1P56199 1179 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 KRTAP10-9P60411 292 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 DYNLT1P63172 113 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 GPLD1P80108 840 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 CDK18Q07002 472 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 FOXM1Q08050 763 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 ELP6Q0PNE2 266 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 ILF3Q12906 894 aaKnown RBP eCLIP9.71□□□□□ -0.863e-10■■■■□ 21.8
SND1-213ENST00000486037 LAMB3Q13751 1172 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 POLD3Q15054 466 aaPredicted RBP9.71□□□□□ -0.86
SND1-213ENST00000486037 KCTD19Q17RG1 926 aaPredicted RBP9.71□□□□□ -0.86
SND1-213ENST00000486037 ANKRD20A8PQ5CZ79 823 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 BRMS1LQ5PSV4 323 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 FAM72AQ5TYM5 149 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 FAM72DQ6L9T8 149 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 FAM72BQ86X60 149 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 RFX6Q8HWS3 928 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 FDCSPQ8NFU4 85 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 SLC37A2Q8TED4 501 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 NCSTNQ92542 709 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 INPP5DQ92835 1189 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 MAGOHBQ96A72 148 aaKnown RBP9.71□□□□□ -0.86
SND1-213ENST00000486037 HAUS1Q96CS2 278 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 AHCYL2Q96HN2 611 aaKnown RBP9.71□□□□□ -0.86
SND1-213ENST00000486037 EXOC2Q96KP1 924 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 CSPG4P5Q96PW8 444 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 ZNF670Q9BS34 389 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 KLC2Q9H0B6 622 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 ING2Q9H160 280 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 CWC15Q9P013 229 aaKnown RBP9.71□□□□□ -0.86
SND1-213ENST00000486037 SUFUQ9UMX1 484 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 ZNF451Q9Y4E5 1061 aa9.71□□□□□ -0.86
SND1-213ENST00000486037 GOLGA6L10A0A0M3HER8 536 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 TSPAN11A1L157 253 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 H3BRJ5 948 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 ZW10O43264 779 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 DPM1O60762 260 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 CEACAM4O75871 244 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 TIAF1O95411 115 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 HOXC4P09017 264 aaPredicted RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 PECAM1P16284 738 aaPredicted RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 AMPD1P23109 780 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 COILP38432 576 aaPredicted RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 ADCY8P40145 1251 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 KCNJ1P48048 391 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 GFERP55789 205 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 TUBB4BP68371 445 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 SLC7A5Q01650 507 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 SNX1Q13596 522 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 TFDP2Q14188 446 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 CHRNA6Q15825 494 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 CCNG2Q16589 344 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 UGP2Q16851 508 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 UGT8Q16880 541 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 CRB2Q5IJ48 1285 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 SLC9A4Q6AI14 798 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 C8orf74Q6P047 294 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 FAM199XQ6PEV8 388 aaPredicted RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 WDR74Q6RFH5 385 aaPredicted RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 NPNTQ6UXI9 565 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 LRRC31Q6UY01 552 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 SPNS3Q6ZMD2 512 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 LYSMD3Q7Z3D4 306 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 VSIG1Q86XK7 387 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 MAP7D3Q8IWC1 876 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 PLD5Q8N7P1 536 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 STAMBPL1Q96FJ0 436 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 C1orf74Q96LT6 269 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 GDAP1L1Q96MZ0 367 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 FRMD8Q9BZ67 464 aaPredicted RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 ZYG11BQ9C0D3 744 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 LRRC19Q9H756 370 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 WDR26Q9H7D7 661 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 ACSS2Q9NR19 701 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 ETNK2Q9NVF9 386 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 SAE1Q9UBE0 346 aaPredicted RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 AMACRQ9UHK6 382 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 DMGDHQ9UI17 866 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms