RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 ARHGAP11AQ6P4F7 1023 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 C16orf87Q6PH81 154 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 FIP1L1Q6UN15 594 aaKnown RBP3.27□□□□□ -1.89
ZNF561-216ENST00000483768 MFSD7Q6UXD7 560 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 INTS8Q75QN2 995 aaKnown RBP3.27□□□□□ -1.89
ZNF561-216ENST00000483768 TAOK1Q7L7X3 1001 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 MIER3Q7Z3K6 550 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 CEP57Q86XR8 500 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 SCYL3Q8IZE3 742 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 DEFB123Q8N688 67 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 UXS1Q8NBZ7 420 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 ROBO4Q8WZ75 1007 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 RAB7BQ96AH8 199 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 ARHGEF26Q96DR7 871 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 ERO1AQ96HE7 468 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 DCLRE1CQ96SD1 692 aaKnown RBP3.27□□□□□ -1.89
ZNF561-216ENST00000483768 HNRNPABQ99729 332 aaKnown RBP3.27□□□□□ -1.89
ZNF561-216ENST00000483768 NPAS1Q99742 590 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 TCHPQ9BT92 498 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 NT5C3AQ9H0P0 336 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 ISCUQ9H1K1 167 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 PRO3102Q9H379 93 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 PDZD7Q9H5P4 517 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 CDCP1Q9H5V8 836 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 TMEM206Q9H813 350 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 SYTL2Q9HCH5 934 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 POLE3Q9NRF9 147 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 SOHLH2Q9NX45 425 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 TMOD2Q9NZR1 351 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 TRPC4Q9UBN4 977 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 HEY2Q9UBP5 337 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 UPB1Q9UBR1 384 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 FBXW11Q9UKB1 542 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 GMEB2Q9UKD1 530 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 STX8Q9UNK0 236 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 C2CD2Q9Y426 696 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 CMAHPQ9Y471 501 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 USP16Q9Y5T5 823 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 TEX264Q9Y6I9 313 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 LAMA2P24043 3122 aaKnown RBP3.27□□□□□ -1.89
ZNF561-216ENST00000483768 TTC28Q96AY4 2481 aa3.27□□□□□ -1.89
ZNF561-216ENST00000483768 TAF1P21675 1872 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 RTL9Q8NET4 1388 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 UBN2Q6ZU65 1347 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 UBR2Q8IWV8 1755 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 LNP1A1A4G5 178 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 PMS2P1A4D2B8 440 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 OOEPA6NGQ2 149 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 C3orf70A6NLC5 250 aaPredicted RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 C2orf81A6NN90 581 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 USP17L23D6RBM5 183 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 SGK1O00141 431 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 VWA5AO00534 786 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 SPRY2O43597 315 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 HCRTR2O43614 444 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 STRNO43815 780 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 CCNT1O60563 726 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 FAM20BO75063 409 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ZC3H11AO75152 810 aaKnown RBP eCLIP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 NME6O75414 186 aaPredicted RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 LETM1O95202 739 aaPredicted RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 SIX3O95343 332 aaPredicted RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 TGFAP01135 160 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 OPN1MWP04001 364 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 CCDC159P0C7I6 412 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 OPN1MW2P0DN77 364 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 OPN1MW3P0DN78 364 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 HSPA5P11021 654 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ZNF37AP17032 561 aaPredicted RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ITIH1P19827 911 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ANXA7P20073 488 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 GCSHP23434 173 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 AHCYP23526 432 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 HOXA13P31271 388 aaPredicted RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 SOAT1P35610 550 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 GJC1P36383 396 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 FASLGP48023 281 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ARCN1P48444 511 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 PITPNBP48739 271 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 KHKP50053 298 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 SNU13P55769 128 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ST8SIA6P61647 398 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 SLC25A3Q00325 362 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 PRKCEQ02156 737 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 GBE1Q04446 702 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 KRTAP1-1Q07627 177 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ELP6Q0PNE2 266 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 KARSQ15046 597 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ST3GAL2Q16842 350 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 MTHFSDQ2M296 383 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 DNTTIP2Q5QJE6 756 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 FAM91A1Q658Y4 838 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 TXNDC8Q6A555 127 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 SFRP4Q6FHJ7 346 aaPredicted RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ARMCX2Q7L311 632 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 CAND1Q86VP6 1230 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 MFN1Q8IWA4 741 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 CLYBLQ8N0X4 340 aa3.26□□□□□ -1.89
ZNF561-216ENST00000483768 ENDOVQ8N8Q3 282 aaKnown RBP3.26□□□□□ -1.89
ZNF561-216ENST00000483768 BANPQ8N9N5 519 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms