RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 PGBD5Q8N414 524 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 SPATA6LQ8N4H0 392 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 TMEM116Q8NCL8 245 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 CREB3L4Q8TEY5 395 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 HARBI1Q96MB7 349 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 TMEM68Q96MH6 324 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 MAP7D2Q96T17 732 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 SH3GL2Q99962 352 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 TMEM47Q9BQJ4 181 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 IL25Q9H293 177 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 NDST4Q9H3R1 872 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 FZD8Q9H461 694 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 DDX31Q9H8H2 851 aaKnown RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 C17orf75Q9HAS0 396 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 HINT3Q9NQE9 182 aaKnown RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 CNGB3Q9NQW8 809 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 TTC7AQ9ULT0 858 aaPredicted RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 SNX9Q9Y5X1 595 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 KCNE2Q9Y6J6 123 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 CEPT1Q9Y6K0 416 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 NOTCH3Q9UM47 2321 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 NHSQ6T4R5 1651 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 LRRC37A2A6NM11 1700 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 SAA2-SAA4A0A096LPE2 208 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 F5H0A9 414 aaPredicted RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 SOCS6O14544 535 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 CLGNO14967 610 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 WDHD1O75717 1129 aaPredicted RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 IPO7O95373 1038 aaKnown RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 G6PDP11413 515 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 NFKBIAP25963 317 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 SSTR2P30874 369 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 PBX3P40426 434 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 ERVFC1-1P60608 527 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 CSTF3Q12996 717 aaKnown RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 KRT32Q14532 448 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 CTF1Q16619 201 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 KRT24Q2M2I5 525 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 EIF2S3LQ2VIR3 472 aaKnown RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 ATP13A5Q4VNC0 1218 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 HAUS3Q68CZ6 603 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 FAM180BQ6P0A1 224 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 FAM122CQ6P4D5 195 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 KCTD18Q6PI47 426 aaPredicted RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 SLC36A4Q6YBV0 504 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 KRBA2Q6ZNG9 492 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 HAPLN4Q86UW8 402 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 ADSSL1Q8N142 457 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 FRMD1Q8N878 549 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 SECTM1Q8WVN6 248 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 SKA1Q96BD8 255 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 MMABQ96EY8 250 aaPredicted RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 BICD1Q96G01 975 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 ZNF385AQ96PM9 386 aaKnown RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 PPP1R3EQ9H7J1 279 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 SCPEP1Q9HB40 452 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 NOX4Q9NPH5 578 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 KRT84Q9NSB2 600 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 EHD2Q9NZN4 543 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 ABI3Q9P2A4 366 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 EP300Q09472 2414 aaPredicted RBP3.64□□□□□ -1.83
COPA-204ENST00000481522 IGF2RP11717 2491 aa3.64□□□□□ -1.83
COPA-204ENST00000481522 CARMIL1Q5VZK9 1371 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 PLEKHG1Q9ULL1 1385 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 MYO9BQ13459 2157 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 SMG6Q86US8 1419 aaKnown RBP3.63□□□□□ -1.83
COPA-204ENST00000481522 FAM237AA0A1B0GTK4 181 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 A0A1B0GUV1 79 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 IFITM10A6NMD0 228 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 SRRM3A6NNA2 597 aaPredicted RBP3.63□□□□□ -1.83
COPA-204ENST00000481522 ENO4A6NNW6 628 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 PLRG1O43660 514 aaKnown RBP3.63□□□□□ -1.83
COPA-204ENST00000481522 BUB3O43684 328 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 TIPRLO75663 272 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 BAIAP3O94812 1187 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 NKX2-2O95096 273 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 SCGB1D1O95968 90 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 AFPP02771 609 aaKnown RBP3.63□□□□□ -1.83
COPA-204ENST00000481522 SRCP12931 536 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 IL7RP16871 459 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 RRM1P23921 792 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 ARL3P36405 182 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 F2RL1P55085 397 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
COPA-204ENST00000481522 DLG1Q12959 904 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 CXorf66Q5JRM2 361 aaPredicted RBP3.63□□□□□ -1.83
COPA-204ENST00000481522 HIST2H2BCQ6DN03 193 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 HIST2H2BDQ6DRA6 164 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 SIGIRRQ6IA17 410 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 WDR73Q6P4I2 378 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 CYP20A1Q6UW02 462 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 PQLC2Q6ZP29 291 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 CACNA2D4Q7Z3S7 1137 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 PXKQ7Z7A4 578 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 CCDC13Q8IYE1 715 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 PDILTQ8N807 584 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 ZNF114Q8NC26 417 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 MAGEC3Q8TD91 643 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 ARHGEF26Q96DR7 871 aa3.63□□□□□ -1.83
COPA-204ENST00000481522 SCMH1Q96GD3 660 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms