RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 LINC00615Q96LM1 132 aaPredicted RBP8.81□□□□□ -1
DDX56-211ENST00000479602 DEPDC7Q96QD5 511 aa8.81□□□□□ -1
DDX56-211ENST00000479602 EBNA1BP2Q99848 306 aaKnown RBP8.81□□□□□ -1
DDX56-211ENST00000479602 MYOCQ99972 504 aa8.81□□□□□ -1
DDX56-211ENST00000479602 LRRC1Q9BTT6 524 aa8.81□□□□□ -1
DDX56-211ENST00000479602 DPH1Q9BZG8 443 aa8.81□□□□□ -1
DDX56-211ENST00000479602 CLPBQ9H078 707 aa8.81□□□□□ -1
DDX56-211ENST00000479602 TCEAL2Q9H3H9 227 aaPredicted RBP8.81□□□□□ -1
DDX56-211ENST00000479602 MBNL1Q9NR56 388 aaKnown RBP8.81□□□□□ -1
DDX56-211ENST00000479602 PHPT1Q9NRX4 125 aaPredicted RBP8.81□□□□□ -1
DDX56-211ENST00000479602 DNAJC28Q9NX36 388 aa8.81□□□□□ -1
DDX56-211ENST00000479602 NCKIPSDQ9NZQ3 722 aa8.81□□□□□ -1
DDX56-211ENST00000479602 DMGDHQ9UI17 866 aaKnown RBP8.81□□□□□ -1
DDX56-211ENST00000479602 CORO1CQ9ULV4 474 aaPredicted RBP8.81□□□□□ -1
DDX56-211ENST00000479602 GPR34Q9UPC5 381 aa8.81□□□□□ -1
DDX56-211ENST00000479602 ENTPD2Q9Y5L3 495 aa8.81□□□□□ -1
DDX56-211ENST00000479602 DNMT3AQ9Y6K1 912 aaPredicted RBP8.81□□□□□ -1
DDX56-211ENST00000479602 FAM169AQ9Y6X4 670 aa8.81□□□□□ -1
DDX56-211ENST00000479602 F8W8V4 182 aa8.8□□□□□ -1
DDX56-211ENST00000479602 ERVH48-1M5A8F1 160 aa8.8□□□□□ -1
DDX56-211ENST00000479602 YY2O15391 372 aa8.8□□□□□ -1
DDX56-211ENST00000479602 EFSO43281 561 aa8.8□□□□□ -1
DDX56-211ENST00000479602 AQP9O43315 295 aa8.8□□□□□ -1
DDX56-211ENST00000479602 CSO75390 466 aaKnown RBP8.8□□□□□ -1
DDX56-211ENST00000479602 TCEA3O75764 348 aa8.8□□□□□ -1
DDX56-211ENST00000479602 SRP72O76094 671 aaKnown RBP8.8□□□□□ -1
DDX56-211ENST00000479602 AP2A2O94973 939 aa8.8□□□□□ -1
DDX56-211ENST00000479602 PRAMEF1O95521 474 aa8.8□□□□□ -1
DDX56-211ENST00000479602 POLBP06746 335 aa8.8□□□□□ -1
DDX56-211ENST00000479602 ALPPL2P10696 532 aa8.8□□□□□ -1
DDX56-211ENST00000479602 JUNDP17535 347 aa8.8□□□□□ -1
DDX56-211ENST00000479602 CTPS1P17812 591 aa8.8□□□□□ -1
DDX56-211ENST00000479602 ITGALP20701 1170 aa8.8□□□□□ -1
DDX56-211ENST00000479602 RPS3P23396 243 aaKnown RBP eCLIP8.8□□□□□ -12e-6■■■■■ 40
DDX56-211ENST00000479602 ARNTP27540 789 aa8.8□□□□□ -1
DDX56-211ENST00000479602 HTR1BP28222 390 aa8.8□□□□□ -1
DDX56-211ENST00000479602 PPARGP37231 505 aaPredicted RBP8.8□□□□□ -1
DDX56-211ENST00000479602 DAB2P98082 770 aa8.8□□□□□ -1
DDX56-211ENST00000479602 CACNG1Q06432 222 aa8.8□□□□□ -1
DDX56-211ENST00000479602 NAB1Q13506 487 aa8.8□□□□□ -1
DDX56-211ENST00000479602 OLIG2Q13516 323 aa8.8□□□□□ -1
DDX56-211ENST00000479602 PEX6Q13608 980 aa8.8□□□□□ -1
DDX56-211ENST00000479602 LRP8Q14114 963 aa8.8□□□□□ -1
DDX56-211ENST00000479602 PDE1CQ14123 709 aaPredicted RBP8.8□□□□□ -1
DDX56-211ENST00000479602 ACOX1Q15067 660 aa8.8□□□□□ -1
DDX56-211ENST00000479602 BCL7AQ4VC05 210 aa8.8□□□□□ -1
DDX56-211ENST00000479602 SPANXN3Q5MJ09 141 aa8.8□□□□□ -1
DDX56-211ENST00000479602 PERM1Q5SV97 790 aa8.8□□□□□ -1
DDX56-211ENST00000479602 CERCAMQ5T4B2 595 aa8.8□□□□□ -1
DDX56-211ENST00000479602 GUSBP11Q6P575 273 aa8.8□□□□□ -1
DDX56-211ENST00000479602 CLEC14AQ86T13 490 aa8.8□□□□□ -1
DDX56-211ENST00000479602 PRUNE1Q86TP1 453 aa8.8□□□□□ -1
DDX56-211ENST00000479602 LRRC6Q86X45 466 aa8.8□□□□□ -1
DDX56-211ENST00000479602 IFT20Q8IY31 132 aa8.8□□□□□ -1
DDX56-211ENST00000479602 SLC35F3Q8IY50 421 aa8.8□□□□□ -1
DDX56-211ENST00000479602 AGGF1Q8N302 714 aaeCLIP8.8□□□□□ -1
DDX56-211ENST00000479602 SLC25A41Q8N5S1 370 aa8.8□□□□□ -1
DDX56-211ENST00000479602 PAF1Q8N7H5 531 aa8.8□□□□□ -1
DDX56-211ENST00000479602 OR4K2Q8NGD2 314 aa8.8□□□□□ -1
DDX56-211ENST00000479602 IFI44Q8TCB0 444 aa8.8□□□□□ -1
DDX56-211ENST00000479602 CALML6Q8TD86 181 aa8.8□□□□□ -1
DDX56-211ENST00000479602 BTN2A2Q8WVV5 523 aa8.8□□□□□ -1
DDX56-211ENST00000479602 FUBP1Q96AE4 644 aaKnown RBP8.8□□□□□ -1
DDX56-211ENST00000479602 PKNOX2Q96KN3 472 aa8.8□□□□□ -1
DDX56-211ENST00000479602 TTC25Q96NG3 672 aa8.8□□□□□ -1
DDX56-211ENST00000479602 WRAP53Q9BUR4 548 aaKnown RBP8.8□□□□□ -1
DDX56-211ENST00000479602 APOOQ9BUR5 198 aa8.8□□□□□ -1
DDX56-211ENST00000479602 TRNAU1APQ9NX07 287 aaKnown RBP8.8□□□□□ -1
DDX56-211ENST00000479602 NSMCE4AQ9NXX6 385 aa8.8□□□□□ -1
DDX56-211ENST00000479602 MOCS1Q9NZB8 636 aa8.8□□□□□ -1
DDX56-211ENST00000479602 SAMD15Q9P1V8 674 aa8.8□□□□□ -1
DDX56-211ENST00000479602 KLHL42Q9P2K6 505 aa8.8□□□□□ -1
DDX56-211ENST00000479602 MTRF1LQ9UGC7 380 aaKnown RBP8.8□□□□□ -1
DDX56-211ENST00000479602 FETUBQ9UGM5 382 aa8.8□□□□□ -1
DDX56-211ENST00000479602 ANAPC5Q9UJX4 755 aa8.8□□□□□ -1
DDX56-211ENST00000479602 CNOT6Q9ULM6 557 aaKnown RBP8.8□□□□□ -1
DDX56-211ENST00000479602 ARL5AQ9Y689 179 aa8.8□□□□□ -1
DDX56-211ENST00000479602 PTPN13Q12923 2485 aa8.8□□□□□ -1
DDX56-211ENST00000479602 KIF26BQ2KJY2 2108 aa8.8□□□□□ -1
DDX56-211ENST00000479602 NBASA2RRP1 2371 aa8.79□□□□□ -1
DDX56-211ENST00000479602 PMS2P1A4D2B8 440 aa8.79□□□□□ -1
DDX56-211ENST00000479602 FADS2P1A8MWK0 482 aa8.79□□□□□ -1
DDX56-211ENST00000479602 CACNB4O00305 520 aaPredicted RBP8.79□□□□□ -1
DDX56-211ENST00000479602 PRKCGP05129 697 aa8.79□□□□□ -1
DDX56-211ENST00000479602 ABHD2P08910 425 aa8.79□□□□□ -1
DDX56-211ENST00000479602 PLA2G2AP14555 144 aa8.79□□□□□ -1
DDX56-211ENST00000479602 ACRV1P26436 265 aa8.79□□□□□ -1
DDX56-211ENST00000479602 MLLT3P42568 568 aaPredicted RBP8.79□□□□□ -1
DDX56-211ENST00000479602 TTPAP49638 278 aa8.79□□□□□ -1
DDX56-211ENST00000479602 VPS41P49754 854 aa8.79□□□□□ -1
DDX56-211ENST00000479602 PCBP4P57723 403 aaKnown RBP8.79□□□□□ -1
DDX56-211ENST00000479602 GABREP78334 506 aa8.79□□□□□ -1
DDX56-211ENST00000479602 SPARCL1Q14515 664 aa8.79□□□□□ -1
DDX56-211ENST00000479602 POU6F1Q14863 301 aa8.79□□□□□ -1
DDX56-211ENST00000479602 CRYMQ14894 314 aa8.79□□□□□ -1
DDX56-211ENST00000479602 SLMAPQ14BN4 828 aa8.79□□□□□ -1
DDX56-211ENST00000479602 TRIP13Q15645 432 aaPredicted RBP8.79□□□□□ -1
DDX56-211ENST00000479602 ANKRD20A4Q4UJ75 823 aa8.79□□□□□ -1
DDX56-211ENST00000479602 LRRC73Q5JTD7 316 aa8.79□□□□□ -1
DDX56-211ENST00000479602 C6orf132Q5T0Z8 1188 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms