RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CCDC3Q9BQI4 270 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 TMEM121BQ9BXQ6 578 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 DDX47Q9H0S4 455 aaKnown RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 ARFGAP3Q9NP61 516 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 KLC4Q9NSK0 619 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 SIRPGQ9P1W8 387 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 SLC23A2Q9UGH3 650 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 KLK13Q9UKR3 277 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 ACSL5Q9ULC5 683 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 PLEKHM1Q9Y4G2 1056 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 ZFHX4Q86UP3 3567 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 AKAP13Q12802 2813 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 ACACAQ13085 2346 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 TCRBV7S3A2A0A539 114 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 MGAT4DA6NG13 374 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 F8W8V4 182 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 NDC80O14777 642 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 SGTAO43765 313 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 POP7O75817 140 aaKnown RBP15.22■□□□□ 0.03
C9orf3-217ENST00000479161 TOP3BO95985 862 aaKnown RBP15.22■□□□□ 0.03
C9orf3-217ENST00000479161 MT-CO3P00414 261 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 MYF5P13349 255 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 AKT1P31749 480 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 NSG1P42857 185 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 PRLHRP49683 370 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 ARSDP51689 593 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 CTSCP53634 463 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 B4GALNT1Q00973 533 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 CBLBQ13191 982 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 PPP1R7Q15435 360 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 TRIP13Q15645 432 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-217ENST00000479161 INSCQ1MX18 579 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 CCDC38Q502W7 563 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 AARS2Q5JTZ9 985 aaKnown RBP15.22■□□□□ 0.03
C9orf3-217ENST00000479161 TMEM220Q6QAJ8 160 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 SPRED1Q7Z699 444 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 SLC9B2Q86UD5 537 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 CAND1Q86VP6 1230 aaKnown RBP15.22■□□□□ 0.03
C9orf3-217ENST00000479161 SERPINA9Q86WD7 417 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 OR2L2Q8NH16 312 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 OR4L1Q8NH43 312 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 ZFPM2Q8WW38 1151 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 HDAC10Q969S8 669 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 CCDC74AQ96AQ1 378 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-217ENST00000479161 NRSN2Q9GZP1 204 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 EPB41L1Q9H4G0 881 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 STN1Q9H668 368 aaKnown RBP15.22■□□□□ 0.03
C9orf3-217ENST00000479161 VPS37BQ9H9H4 285 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 CHRAC1Q9NRG0 131 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 PIH1D1Q9NWS0 290 aaKnown RBP15.22■□□□□ 0.03
C9orf3-217ENST00000479161 SOX13Q9UN79 622 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 PRKAB1Q9Y478 270 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 RNF215Q9Y6U7 377 aa15.22■□□□□ 0.03
C9orf3-217ENST00000479161 CFAP47Q6ZTR5 3102 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 FAM237BA0A1B0GVD1 139 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 CCDC162PA2VCL2 907 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 SDR42E2A6NKP2 422 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 RHPN2P1A8MT19 583 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 GPR39O43194 453 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 IVDP26440 423 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 EPHA4P54764 986 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 SESN2P58004 480 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-217ENST00000479161 PRAMEP78395 509 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 GPLD1P80108 840 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 TMPRSS15P98073 1019 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 RTP5Q14D33 572 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 ZRANB3Q5FWF4 1079 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 RNASEH2BQ5TBB1 312 aaKnown RBP15.21■□□□□ 0.03
C9orf3-217ENST00000479161 RBM44Q6ZP01 1051 aaKnown RBP15.21■□□□□ 0.03
C9orf3-217ENST00000479161 ZNF572Q7Z3I7 529 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-217ENST00000479161 CCNJLQ8IV13 435 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 PIANPQ8IYJ0 282 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 SLC37A2Q8TED4 501 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 SGF29Q96ES7 293 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 CAPZA3Q96KX2 299 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 ZNF778Q96MU6 729 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 SERPINB12Q96P63 405 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 LRRN3Q9H3W5 708 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 SUDS3Q9H7L9 328 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-217ENST00000479161 KCNK6Q9Y257 313 aa15.21■□□□□ 0.03
C9orf3-217ENST00000479161 USP24Q9UPU5 2620 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 KIF2AO00139 706 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-217ENST00000479161 DNALI1O14645 258 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-217ENST00000479161 PPM1DO15297 605 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 TMEM63AO94886 807 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 CAPNS1P04632 268 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 CCKBRP32239 447 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 VPS41P49754 854 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 MAZP56270 477 aaKnown RBP15.2■□□□□ 0.02
C9orf3-217ENST00000479161 UBE2IP63279 158 aaKnown RBP15.2■□□□□ 0.02
C9orf3-217ENST00000479161 DR1Q01658 176 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 TARDBPQ13148 414 aaKnown RBP eCLIP15.2■□□□□ 0.02
C9orf3-217ENST00000479161 RPA4Q13156 261 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 SPIDRQ14159 915 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 TCEA2Q15560 299 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 ISXQ2M1V0 245 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 CCDC157Q569K6 752 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 ANKRD22Q5VYY1 191 aa15.2■□□□□ 0.02
C9orf3-217ENST00000479161 IGF2-ASQ6U949 168 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms