RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 TMTC3Q6ZXV5 915 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 TRMT1LQ7Z2T5 733 aaKnown RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 KDELC2Q7Z4H8 507 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 GATAD2AQ86YP4 633 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 RHPN2Q8IUC4 686 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 CARNMT1Q8N4J0 409 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 LEMD2Q8NC56 503 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 CEP70Q8NHQ1 597 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 SCAMP5Q8TAC9 235 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 LNX1Q8TBB1 728 aaPredicted RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 GPT2Q8TD30 523 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 DEPDC1BQ8WUY9 529 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 RUFY2Q8WXA3 655 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 TBC1D31Q96DN5 1066 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 JAKMIP1Q96N16 626 aaKnown RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 GAD1Q99259 594 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 PRPF18Q99633 342 aaKnown RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 KXD1Q9BQD3 176 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 CLSTN3Q9BQT9 956 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 DESI2Q9BSY9 194 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 CINPQ9BW66 212 aaPredicted RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 APOL6Q9BWW8 343 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 ADGRE3Q9BY15 652 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 GPR88Q9GZN0 384 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 LSG1Q9H089 658 aaKnown RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 ARRDC1-AS1Q9H2J1 176 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 PABPC3Q9H361 631 aaKnown RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 WDR26Q9H7D7 661 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 ZWILCHQ9H900 591 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 TRPV4Q9HBA0 871 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 ZFP14Q9HCL3 533 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 ZNF334Q9HCZ1 680 aaPredicted RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 SEPSECSQ9HD40 501 aaKnown RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 HEYLQ9NQ87 328 aaPredicted RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 ARL8BQ9NVJ2 186 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 ADAM28Q9UKQ2 775 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 ODF2LQ9ULJ1 636 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 TMCC3Q9ULS5 477 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 FZD4Q9ULV1 537 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 NDRG2Q9UN36 371 aaKnown RBP3.87□□□□□ -1.79
RPL39-203ENST00000477403 NEUROG3Q9Y4Z2 214 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 SPEGQ15772 3267 aa3.87□□□□□ -1.79
RPL39-203ENST00000477403 SF3B1O75533 1304 aaKnown RBP eCLIP3.87□□□□□ -1.79
RPL39-203ENST00000477403 DMXL2Q8TDJ6 3036 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 C17orf113A0A1B0GUU1 675 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 ESYT2A0FGR8 921 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 ARHGEF37A1IGU5 675 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 ZNF263O14978 683 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 CCL16O15467 120 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 GJB3O75712 270 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 RPP40O75818 363 aaKnown RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 ACTL6BO94805 426 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 RHOBTB1O94844 696 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 WDR47O94967 919 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 PGM3O95394 542 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 SCGB1D1O95968 90 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 TMEM191BP0C7N4 346 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 PRF1P14222 555 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 GNA11P29992 359 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 GDI1P31150 447 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 POLE2P56282 527 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 NTHL1P78549 312 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 CCDC173Q0VFZ6 552 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 GRIK3Q13003 919 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 DRP2Q13474 957 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 FHL1Q13642 323 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 SF3A2Q15428 464 aaKnown RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 PSMD5Q16401 504 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 ZSCAN23Q3MJ62 389 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 CTXN3Q4LDR2 81 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 SOWAHCQ53LP3 525 aaPredicted RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 ARL6IP4Q66PJ3 421 aaKnown RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 GRHL2Q6ISB3 625 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 NOTUMQ6P988 496 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 BHLHA9Q7RTU4 235 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 R3HCC1LQ7Z5L2 792 aaKnown RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 IRF2BP2Q7Z5L9 587 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 RALGPS2Q86X27 583 aaPredicted RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 ANKRD13BQ86YJ7 626 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 SLC44A2Q8IWA5 706 aaPredicted RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 CCDC117Q8IWD4 279 aaPredicted RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 MFSD6LQ8IWD5 586 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 MB21D2Q8IYB1 491 aaPredicted RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 CEP57L1Q8IYX8 460 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 OR8H1Q8NGG4 311 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 MBD3L2Q8NHZ7 208 aaPredicted RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 BICD2Q8TD16 824 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 CSGALNACT1Q8TDX6 532 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 CCDC12Q8WUD4 166 aaPredicted RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 TCP11Q8WWU5 503 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 PRPF31Q8WWY3 499 aaKnown RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 PSPC1Q8WXF1 523 aaKnown RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 SMARCD2Q92925 531 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 CCDC47Q96A33 483 aaKnown RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 SDCCAG3Q96C92 435 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 MCRS1Q96EZ8 462 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 PRR11Q96HE9 360 aaPredicted RBP3.86□□□□□ -1.79
RPL39-203ENST00000477403 CCDC34Q96HJ3 373 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 NLRP4Q96MN2 994 aa3.86□□□□□ -1.79
RPL39-203ENST00000477403 GPATCH1Q9BRR8 931 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms