RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 EPB41L5Q9HCM4 733 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ATP13A2Q9NQ11 1180 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SETD4Q9NVD3 440 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TRNAU1APQ9NX07 287 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ING3Q9NXR8 418 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TFCP2L1Q9NZI6 479 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 STK26Q9P289 416 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 KLHL14Q9P2G3 628 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CNOT8Q9UFF9 292 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF148Q9UQR1 794 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 WBP11Q9Y2W2 641 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 MAP3K19Q56UN5 1328 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 KIF16BQ96L93 1317 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SYCP2Q9BX26 1530 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 COL5A3P25940 1745 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 LRPPRCP42704 1394 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RIMS2Q9UQ26 1411 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 VPS13AQ96RL7 3174 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 A0A0U1RQS6 177 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 LNP1A1A4G5 178 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 C5orf51A6NDU8 294 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZSCAN5BA6NJL1 495 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CXorf49A8MYA2 514 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 J3QKU1 62 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SOCS6O14544 535 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PRRG1O14668 218 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PPEF2O14830 753 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 MAPK13O15264 365 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 TLX2O43763 284 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GPRIN2O60269 458 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RANBP6O60518 1105 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 DGAT1O75907 488 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 FLOT1O75955 427 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SCAF4O95104 1147 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 MFN2O95140 757 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CH25HO95992 272 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 AGTP01019 485 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PGK2P07205 417 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RHOP08100 348 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 G6PDP11413 515 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ANXA8P13928 327 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PLA2G2AP14555 144 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 MMP9P14780 707 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF18P17022 549 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF182P17025 639 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SDHBP21912 280 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ITGA3P26006 1051 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GSTM2P28161 218 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PTPN4P29074 926 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 HTR7P34969 479 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 BMI1P35226 326 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CASRP41180 1078 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CETN2P41208 172 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PTGER3P43115 390 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KCNJ1P48048 391 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GZMKP49863 264 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 MEOX1P50221 254 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SERPINH1P50454 418 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ITGA1P56199 1179 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 FOXL2P58012 376 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ACTR3P61158 418 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RPS8P62241 208 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ACY1Q03154 408 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF844Q08AG5 666 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CCDC173Q0VFZ6 552 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SPP2Q13103 211 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 BFSP2Q13515 415 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RRP1BQ14684 758 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 DRAP1Q14919 205 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 VEPH1Q14D04 833 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 EIF4HQ15056 248 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CEBPEQ15744 281 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GRIK4Q16099 956 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 TBR1Q16650 682 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 KRT24Q2M2I5 525 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF792Q3KQV3 632 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZIK1Q3SY52 487 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLC36A3Q495N2 470 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CCDC152Q4G0S7 254 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 GLE1Q53GS7 698 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 NOMO2Q5JPE7 1267 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SPDYCQ5MJ68 293 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 RNASEH2BQ5TBB1 312 aaKnown RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SERTAD4-AS1Q5TG53 156 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ANXA8L1Q5VT79 327 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 METTL11BQ5VVY1 283 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 AP1ARQ63HQ0 302 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 FAM90A2PQ658T7 463 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 TXNDC8Q6A555 127 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 NOTUMQ6P988 496 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 FBXO46Q6PJ61 603 aaPredicted RBP2.87□□□□□ -1.95
HMGN4-202ENST00000477243 CFAP77Q6ZQR2 320 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 Q6ZS46 218 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PRSS45Q7RTY3 260 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 PRSS42Q7Z5A4 293 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 ZAR1Q86SH2 424 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 WFDC3Q8IUB2 231 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 LRRC49Q8IUZ0 686 aa2.87□□□□□ -1.95
HMGN4-202ENST00000477243 SLC22A9Q8IVM8 553 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms