RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 FAM216AQ8WUB2 273 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 TEKT4Q8WW24 435 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 ARSGQ96EG1 525 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 SCMH1Q96GD3 660 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 FER1L6-AS2Q96M78 137 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 CFAP57Q96MR6 1250 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 MTERF1Q99551 399 aaKnown RBP5.82□□□□□ -1.48
VPS50-212ENST00000476413 OLFM1Q99784 485 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 SLC29A3Q9BZD2 475 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 HIF1ANQ9NWT6 349 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 RCC2Q9P258 522 aaKnown RBP5.82□□□□□ -1.48
VPS50-212ENST00000476413 MYO6Q9UM54 1294 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 PCDHA7Q9UN72 937 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 EVPLQ92817 2033 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 PTPRCP08575 1304 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 HEPACAM2A8MVW5 462 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 PLK4O00444 970 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 TO15178 435 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 KDM4BO94953 1096 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 GLUD1P00367 558 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 VPREB1P12018 145 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 GLUD2P49448 558 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 CSE1LP55060 971 aaKnown RBP5.81□□□□□ -1.48
VPS50-212ENST00000476413 DSC1Q08554 894 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 ZNF155Q12901 538 aaPredicted RBP5.81□□□□□ -1.48
VPS50-212ENST00000476413 CAMK2DQ13557 499 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 COG2Q14746 738 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 CST9LP1Q5W188 147 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 GPR180Q86V85 440 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 C1orf87Q8N0U7 546 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 PI4KAP1Q8N8J0 262 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 TSPAN14Q8NG11 270 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 MAGEC3Q8TD91 643 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 ZNF653Q96CK0 615 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 ERLEC1Q96DZ1 483 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 C3orf30Q96M34 536 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 NEK1Q96PY6 1258 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 NAA11Q9BSU3 229 aaPredicted RBP5.81□□□□□ -1.48
VPS50-212ENST00000476413 ABHD6Q9BV23 337 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 SF3B5Q9BWJ5 86 aaKnown RBP5.81□□□□□ -1.48
VPS50-212ENST00000476413 FAM129AQ9BZQ8 928 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 ANKZF1Q9H8Y5 726 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 CHMP1AQ9HD42 196 aaPredicted RBP5.81□□□□□ -1.48
VPS50-212ENST00000476413 PRMT7Q9NVM4 692 aaPredicted RBP5.81□□□□□ -1.48
VPS50-212ENST00000476413 KLHL9Q9P2J3 617 aa5.81□□□□□ -1.48
VPS50-212ENST00000476413 OR2M5A3KFT3 312 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 CD8B2A6NJW9 211 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 H0YIN7 160 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 TRUB2O95900 331 aaKnown RBP5.8□□□□□ -1.48
VPS50-212ENST00000476413 LINC00271P0C7V0 271 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 HNRNPKP61978 463 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS50-212ENST00000476413 TFCP2Q12800 502 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 TROAPQ12815 778 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 C6orf163Q5TEZ5 329 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 ZDHHC20Q5W0Z9 365 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 ALS2CLQ60I27 953 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 FAM109BQ6ICB4 259 aaPredicted RBP5.8□□□□□ -1.48
VPS50-212ENST00000476413 ZNF549Q6P9A3 640 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 CHST3Q7LGC8 479 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 CCDC186Q7Z3E2 898 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 ZNF575Q86XF7 245 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 AFAP1Q8N556 730 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 SLC5A8Q8N695 610 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 RBMXL3Q8N7X1 1067 aaKnown RBP5.8□□□□□ -1.48
VPS50-212ENST00000476413 SMRP1Q8NCR6 262 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 MIB2Q96AX9 1013 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 SPACA9Q96E40 222 aaPredicted RBP5.8□□□□□ -1.48
VPS50-212ENST00000476413 C16orf70Q9BSU1 422 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 IL25Q9H293 177 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 MRPL44Q9H9J2 332 aaKnown RBP5.8□□□□□ -1.48
VPS50-212ENST00000476413 TMEM30AQ9NV96 361 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 TUBE1Q9UJT0 475 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 PRAG1Q86YV5 1406 aa5.8□□□□□ -1.48
VPS50-212ENST00000476413 PDS5AQ29RF7 1337 aaKnown RBP5.79□□□□□ -1.48
VPS50-212ENST00000476413 EDDM13A0A1B0GTR0 161 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 PRAMEF11O60813 436 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 CCDC175P0C221 793 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 IFNAR1P17181 557 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 RALGDSQ12967 914 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 GAGE2BQ13066 116 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 MYBPHQ13203 477 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 SCARB2Q14108 478 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 PLCB4Q15147 1175 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 GAGE2EQ4V326 116 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 HECTD3Q5T447 861 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 GAGE2AQ6NT46 116 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 RHBDF2Q6PJF5 856 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 SUSD1Q6UWL2 747 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 CCNI2Q6ZMN8 369 aaPredicted RBP5.79□□□□□ -1.48
VPS50-212ENST00000476413 SLC38A5Q8WUX1 472 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 TANKQ92844 425 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 ABTB1Q969K4 478 aaPredicted RBP5.79□□□□□ -1.48
VPS50-212ENST00000476413 QRFPRQ96P65 431 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 CNOT10Q9H9A5 744 aaKnown RBP5.79□□□□□ -1.48
VPS50-212ENST00000476413 EQTNQ9NQ60 294 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 MBNL1Q9NR56 388 aaKnown RBP5.79□□□□□ -1.48
VPS50-212ENST00000476413 MRGBPQ9NV56 204 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 GAGE2DQ9UEU5 116 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 PCSK5Q92824 1860 aa5.79□□□□□ -1.48
VPS50-212ENST00000476413 CCER2I3L3R5 266 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms