RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 LRIG2O94898 1065 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 CLEC2LP0C7M8 214 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 NMBRP28336 390 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 DDOSTP39656 456 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 RGS7P49802 495 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 EEFSECP57772 596 aaKnown RBP10.47□□□□□ -0.73
ABCF1-205ENST00000475993 SLC6A3Q01959 620 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 ZMYND11Q15326 602 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 Q5BKY6 102 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
ABCF1-205ENST00000475993 KCTD11Q693B1 232 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 LCLAT1Q6UWP7 414 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 SPATC1Q76KD6 591 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 PID1Q7Z2X4 250 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 PROSER1Q86XN7 944 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 EID3Q8N140 333 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 MIER2Q8N344 545 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 NETO2Q8NC67 525 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 FBLIM1Q8WUP2 373 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 CENPIQ92674 756 aaPredicted RBP10.47□□□□□ -0.73
ABCF1-205ENST00000475993 GTF2H4Q92759 462 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 SNAPC3Q92966 411 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 CCDC126Q96EE4 140 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 CYP4F12Q9HCS2 524 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 PXMP2Q9NR77 195 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 MAP3K20Q9NYL2 800 aaKnown RBP10.47□□□□□ -0.73
ABCF1-205ENST00000475993 SIX4Q9UIU6 781 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 GMEB2Q9UKD1 530 aa10.47□□□□□ -0.73
ABCF1-205ENST00000475993 HUS1O60921 280 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 EGFRP00533 1210 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 HTR1EP28566 365 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 GGT5P36269 586 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 KPNA2P52292 529 aaKnown RBP10.46□□□□□ -0.73
ABCF1-205ENST00000475993 OR2B6P58173 313 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 RAD51Q06609 339 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 TARDBPQ13148 414 aaKnown RBP eCLIP10.46□□□□□ -0.73
ABCF1-205ENST00000475993 KCNAB2Q13303 367 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 NFE2L1Q14494 772 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 ZNF404Q494X3 552 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 YIF1BQ5BJH7 314 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 MAP1SQ66K74 1059 aaPredicted RBP10.46□□□□□ -0.73
ABCF1-205ENST00000475993 DPH6Q7L8W6 267 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 ZNF438Q7Z4V0 828 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 ZDHHC13Q8IUH4 622 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 PLD3Q8IV08 490 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 LRRC71Q8N4P6 559 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 DNAJB14Q8TBM8 379 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 ASB2Q96Q27 587 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 CYP2S1Q96SQ9 504 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 ZC3H12CQ9C0D7 883 aaKnown RBP10.46□□□□□ -0.73
ABCF1-205ENST00000475993 LIN7BQ9HAP6 207 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 RNF112Q9ULX5 631 aa10.46□□□□□ -0.73
ABCF1-205ENST00000475993 NRCAMQ92823 1304 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 FAM95CA0A1B0GW59 222 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 FAM92AA1XBS5 289 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 METTL15A6NJ78 407 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 C9JVG2 144 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 PDHXO00330 501 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 NDUFA2O43678 99 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 NOS1APO75052 506 aaPredicted RBP10.46□□□□□ -0.74
ABCF1-205ENST00000475993 TULP3O75386 442 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 GTF2E2P29084 291 aaKnown RBP10.46□□□□□ -0.74
ABCF1-205ENST00000475993 RYKP34925 604 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 CAP2P40123 477 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 NPY2RP49146 381 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 NDST1P52848 882 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 ZNF45Q02386 682 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 FADDQ13158 208 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 CLCA4Q14CN2 919 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 TECRLQ5HYJ1 363 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 ZNF691Q5VV52 312 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 ERAP2Q6P179 960 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 BLOC1S3Q6QNY0 202 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 PLEKHM3Q6ZWE6 761 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 NLGN4XQ8N0W4 816 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 PYROXD2Q8N2H3 581 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 CCDC185Q8N715 623 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 LPAR1Q92633 364 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 RPL3LQ92901 407 aaKnown RBP10.46□□□□□ -0.74
ABCF1-205ENST00000475993 PDGFDQ9GZP0 370 aaPredicted RBP10.46□□□□□ -0.74
ABCF1-205ENST00000475993 PRDM12Q9H4Q4 367 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 GSTO2Q9H4Y5 243 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 SMURF2Q9HAU4 748 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 SDR39U1Q9NRG7 319 aaPredicted RBP10.46□□□□□ -0.74
ABCF1-205ENST00000475993 USE1Q9NZ43 259 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 DPP7Q9UHL4 492 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 ENOPH1Q9UHY7 261 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 TSPAN16Q9UKR8 245 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 TRIP11Q15643 1979 aa10.46□□□□□ -0.74
ABCF1-205ENST00000475993 TRAV6A0A075B6T7 132 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 A0A087X1B8 175 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 SPATA31C2B4DYI2 1134 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 G3V2T6 193 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 H0Y626 953 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 XPNPEP2O43895 674 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 MSCO60682 206 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 CNTN5O94779 1100 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 TRIM16O95361 564 aa10.45□□□□□ -0.74
ABCF1-205ENST00000475993 SOX11P35716 441 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms