RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CCDC97Q96F63 343 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 COX14Q96I36 57 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 C7orf26Q96N11 449 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 COPS8Q99627 209 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 SLC30A3Q99726 388 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 LRFN3Q9BTN0 628 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 RIOK2Q9BVS4 552 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 BOCQ9BWV1 1114 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 C1QTNF2Q9BXJ5 285 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 IQCGQ9H095 443 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 MRPL46Q9H2W6 279 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 MANSC1Q9H8J5 431 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 MLXIPLQ9NP71 852 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ZDHHC4Q9NPG8 344 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 DYRK4Q9NR20 520 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 OXSMQ9NWU1 459 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GALPQ9UBC7 116 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GNPTGQ9UJJ9 305 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 HAO1Q9UJM8 370 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ITM2BQ9Y287 266 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 HCN4Q9Y3Q4 1203 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 PRSS21Q9Y6M0 314 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 TICRRQ7Z2Z1 1910 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 UBA6A0AVT1 1052 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 TCP11X1B4DZS4 312 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 QSOX1O00391 747 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SNX3O60493 162 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 LILRB5O75023 590 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 NIPSNAP2O75323 286 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 H2AFYO75367 372 aaKnown RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 VPS26AO75436 327 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 GPC4O75487 556 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 RHOBTB1O94844 696 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SNUPNO95149 360 aaKnown RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 KLF8O95600 359 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SLC4A1P02730 911 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SERPINE1P05121 402 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 HOXC4P09017 264 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 GSTM1P09488 218 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CCDC166P0CW27 439 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CBSLP0DN79 551 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 MTHFD2P13995 350 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 ATP1B2P14415 290 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CBSP35520 551 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 TRIM23P36406 574 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SERPINB5P36952 375 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 WASP42768 502 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 KCNC1P48547 511 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 PGGT1BP53609 377 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SEC13P55735 322 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 OCRLQ01968 901 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 GSTM4Q03013 218 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SFSWAPQ12872 951 aaKnown RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF284Q2VY69 593 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 POM121L1PQ3SYA9 428 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 BCL7AQ4VC05 210 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 KHDC1Q4VXA5 237 aaKnown RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 LDLRAP1Q5SW96 308 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 ATG16L1Q676U5 607 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 KIAA1161Q6NSJ0 714 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CGB2Q6NT52 195 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CYHR1Q6ZMK1 362 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF852Q6ZMS4 543 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SYT13Q7L8C5 426 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 PIM3Q86V86 326 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 KBTBD6Q86V97 674 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 TMPRSS6Q8IU80 811 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 NUDCD3Q8IVD9 361 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 C10orf107Q8IVU9 208 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 HDDC3Q8N4P3 179 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CLDN19Q8N6F1 224 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 PAF1Q8N7H5 531 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 GDAP1Q8TB36 358 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 BCAS4Q8TDM0 211 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 LRRC8CQ8TDW0 803 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF473Q8WTR7 871 aaKnown RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 STON2Q8WXE9 905 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 INPP5DQ92835 1189 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 PTERQ96BW5 349 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 AP2M1Q96CW1 435 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CCDC126Q96EE4 140 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 MRGPRX1Q96LB2 322 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 LINC00615Q96LM1 132 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 LENG8Q96PV6 779 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 ATOH8Q96SQ7 321 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 NELL2Q99435 816 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 GPR21Q99679 349 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SPATA16Q9BXB7 569 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 C1QTNF3Q9BXJ4 246 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 OSBPL6Q9BZF3 934 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CLPBQ9H078 707 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CCDC68Q9H2F9 335 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 TRIM39Q9HCM9 518 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 PREBQ9HCU5 417 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CD320Q9NPF0 282 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SPATS2LQ9NUQ6 558 aaKnown RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 SERGEFQ9UGK8 458 aa6.53□□□□□ -1.36
ATG4A-207ENST00000474825 MBD1Q9UIS9 605 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-207ENST00000474825 CRLS1Q9UJA2 301 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms