RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PCDHGA6Q9Y5G7 932 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 FER1L5A0AVI2 2057 aa13.75□□□□□ -0.21
CCDC78-209ENST00000474647 CDK14O94921 469 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 CYP1A2P05177 515 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 NELFEP18615 380 aaKnown RBP13.74□□□□□ -0.21
CCDC78-209ENST00000474647 IDSP22304 550 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 HALP42357 657 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 PGDP52209 483 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 DCDC1P59894 354 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 AP1B1Q10567 949 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-209ENST00000474647 ZBTB17Q13105 803 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 SEMA5AQ13591 1074 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 PDK2Q15119 407 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 CPZQ66K79 652 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 CAPRIN2Q6IMN6 1127 aaKnown RBP13.74□□□□□ -0.21
CCDC78-209ENST00000474647 LUZP1Q86V48 1076 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 ZNF547Q8IVP9 402 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 MAP7D3Q8IWC1 876 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 KLHL6Q8WZ60 621 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 SLC40A1Q9NP59 571 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 RAD18Q9NS91 495 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 PLEKHB1Q9UF11 243 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-209ENST00000474647 HEY1Q9Y5J3 304 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 MYO9AB2RTY4 2548 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 ITPR2Q14571 2701 aa13.74□□□□□ -0.21
CCDC78-209ENST00000474647 CELSR2Q9HCU4 2923 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 IGHV5-51A0A0C4DH38 117 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 A0A1B0GTH6 734 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 GOLGA6L3A6NEY3 463 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 ARGFXA6NJG6 315 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 C21orf140B9A014 251 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 SERPINC1P01008 464 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 EBLN1P0CF75 366 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 VCLP18206 1134 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 ARL4DP49703 201 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 TAS2R40P59535 323 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 GTF2H3Q13889 308 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 PLCL1Q15111 1095 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 NADK2Q4G0N4 442 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 KHDC1Q4VXA5 237 aaKnown RBP13.73□□□□□ -0.21
CCDC78-209ENST00000474647 HGSNATQ68CP4 663 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 PDPK2PQ6A1A2 396 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 PWWP2BQ6NUJ5 590 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 FAM199XQ6PEV8 388 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-209ENST00000474647 ABRAXAS1Q6UWZ7 409 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 GAS2L3Q86XJ1 694 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 APLFQ8IW19 511 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-209ENST00000474647 RBM12BQ8IXT5 1001 aaKnown RBP13.73□□□□□ -0.21
CCDC78-209ENST00000474647 PQLC3Q8N755 202 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 GPR150Q8NGU9 434 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 NAP1L5Q96NT1 182 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-209ENST00000474647 AGAP3Q96P47 875 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 SLC25A23Q9BV35 468 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 BPIFA1Q9NP55 256 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 WDR37Q9Y2I8 494 aa13.73□□□□□ -0.21
CCDC78-209ENST00000474647 SNRNP200O75643 2136 aaKnown RBP13.72□□□□□ -0.21
CCDC78-209ENST00000474647 A0A087X0T9 212 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 VEGFDO43915 354 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 FAM228BP0C875 321 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 FOLR1P15328 257 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 BPIP17213 487 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 IFI35P80217 286 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-209ENST00000474647 PPIDQ08752 370 aaKnown RBP13.72□□□□□ -0.21
CCDC78-209ENST00000474647 UGT8Q16880 541 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 CERS6Q6ZMG9 384 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 TMC3Q7Z5M5 1100 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 NT5DC3Q86UY8 548 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 CNTD1Q8N815 330 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 GALNT11Q8NCW6 608 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 SSC4DQ8WTU2 575 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 SEC14L1Q92503 715 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 UBXN4Q92575 508 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 TTC25Q96NG3 672 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 TRIB3Q96RU7 358 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 AKIRIN1Q9H9L7 192 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-209ENST00000474647 MAGEE1Q9HCI5 957 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 ACSS2Q9NR19 701 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 CTTNBP2NLQ9P2B4 639 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 MAP10Q9P2G4 905 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 NFKBIL1Q9UBC1 381 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-209ENST00000474647 PSMD13Q9UNM6 376 aa13.72□□□□□ -0.21
CCDC78-209ENST00000474647 BZW2Q9Y6E2 419 aaKnown RBP13.72□□□□□ -0.21
CCDC78-209ENST00000474647 MDC1Q14676 2089 aaKnown RBP13.71□□□□□ -0.21
CCDC78-209ENST00000474647 A1L4Q6 167 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 GOLGA6L19H0YKK7 550 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 AURKAO14965 403 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 PROSCO94903 275 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 SERPING1P05155 500 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 PBLDP30039 288 aaPredicted RBP13.71□□□□□ -0.21
CCDC78-209ENST00000474647 CCL11P51671 97 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 RPS15P62841 145 aaKnown RBP13.71□□□□□ -0.21
CCDC78-209ENST00000474647 TPM4P67936 248 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 PDE1BQ01064 536 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 CDK18Q07002 472 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 IL10RAQ13651 578 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 ATP13A5Q4VNC0 1218 aa13.71□□□□□ -0.21
CCDC78-209ENST00000474647 DNTTIP2Q5QJE6 756 aaKnown RBP13.71□□□□□ -0.21
CCDC78-209ENST00000474647 ALKBH5Q6P6C2 394 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms