RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 BTAF1O14981 1849 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 AKAP11Q9UKA4 1901 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 TMEM129A0AVI4 362 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 GOLGA6L3A6NEY3 463 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 LGALS16A8MUM7 142 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 KRTAP4-16G5E9R7 235 aaPredicted RBP1.66□□□□□ -2.14
CCDC39-203ENST00000473854 PRC1O43663 620 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 PLIN1O60240 522 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 PDE9AO76083 593 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 NBPF7P0C2Y1 421 aaPredicted RBP1.66□□□□□ -2.14
CCDC39-203ENST00000473854 CSF2RAP15509 400 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 SLC6A12P48065 614 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 NEK3P51956 506 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 TBX4P57082 545 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 ISL1P61371 349 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 YWHAZP63104 245 aaKnown RBP1.66□□□□□ -2.14
CCDC39-203ENST00000473854 WDR43Q15061 677 aaKnown RBP eCLIP1.66□□□□□ -2.14
CCDC39-203ENST00000473854 C20orf194Q5TEA3 1177 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 CCDC181Q5TID7 509 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 IL31Q6EBC2 164 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 OR7E24Q6IFN5 339 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 KLHL17Q6TDP4 642 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 PLEKHM3Q6ZWE6 761 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 KRTAP11-1Q8IUC1 163 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 FOXRED2Q8IWF2 684 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 ZNF527Q8NB42 609 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 EXOC6Q8TAG9 804 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 GDPD5Q8WTR4 605 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 HSPH1Q92598 858 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 RASL10AQ92737 203 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 EID2BQ96D98 161 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 ZNF570Q96NI8 536 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 NEUROD6Q96NK8 337 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 QRFPRQ96P65 431 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 TRAPPC9Q96Q05 1148 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 PLEKHF1Q96S99 279 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 RTN4RQ9BZR6 473 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 PABPC3Q9H361 631 aaKnown RBP1.66□□□□□ -2.14
CCDC39-203ENST00000473854 PLEKHA2Q9HB19 425 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 ARNT2Q9HBZ2 717 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 CHST12Q9NRB3 414 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 GEMIN8Q9NWZ8 242 aaKnown RBP1.66□□□□□ -2.14
CCDC39-203ENST00000473854 TMEM181Q9P2C4 612 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 CDC23Q9UJX2 597 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 RRP7AQ9Y3A4 280 aaKnown RBP1.66□□□□□ -2.14
CCDC39-203ENST00000473854 JRKLQ9Y4A0 524 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 ARHGEF10O15013 1369 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 KDRP35968 1356 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 MSH6P52701 1360 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 C1orf167Q5SNV9 1468 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 MYH8P13535 1937 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 DOCK2Q92608 1830 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 LY75O60449 1722 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 MEGF6O75095 1541 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 DCCP43146 1447 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 ATP10DQ9P241 1426 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 ASTN2O75129 1339 aaPredicted RBP1.66□□□□□ -2.14
CCDC39-203ENST00000473854 ACEP12821 1306 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 TTC21BQ7Z4L5 1316 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 STK36Q9NRP7 1315 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 FANCIQ9NVI1 1328 aa1.66□□□□□ -2.14
CCDC39-203ENST00000473854 SCN7AQ01118 1682 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 SBNO1A3KN83 1393 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 RTL1A6NKG5 1358 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 FLT4P35916 1363 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 A0A1W2PPI3 338 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 ARHGAP10A1A4S6 786 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 KLRF2D3W0D1 207 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 E7EVH7 732 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 CAND2O75155 1236 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 NR3C1P04150 777 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 HMGB1P09429 215 aaKnown RBP1.65□□□□□ -2.15
CCDC39-203ENST00000473854 IGHV4-38-2P0DP08 117 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 ITGA3P26006 1051 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 PPM1AP35813 382 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 AMPHP49418 695 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 MCM2P49736 904 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 BLKP51451 505 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 PNLIPRP1P54315 467 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 SNX16P57768 344 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 KIR2DS3Q14952 304 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 RRS1Q15050 365 aaKnown RBP1.65□□□□□ -2.15
CCDC39-203ENST00000473854 PFKFB4Q16877 469 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 EDRF1Q3B7T1 1238 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 MMEL1Q495T6 779 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 MAP9Q49MG5 647 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 FBXO43Q4G163 708 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 C2CD6Q53TS8 623 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 ALS2CLQ60I27 953 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 PWWP2BQ6NUJ5 590 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 BHLHB9Q6PI77 547 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 SYT13Q7L8C5 426 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 RASGRP2Q7LDG7 609 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 PRSS45Q7RTY3 260 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 SRLQ86TD4 932 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 TBC1D26Q86UD7 250 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 TICAM1Q8IUC6 712 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 SCML4Q8N228 414 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 Q8N377 158 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 TNIP3Q96KP6 325 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms