RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.57	□□□□□ -1.68
BBX-223	ENST00000473542	RAB6C	Q9H0N0	254 aa		4.57	□□□□□ -1.68
BBX-223	ENST00000473542	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.57	□□□□□ -1.68
BBX-223	ENST00000473542	NOX4	Q9NPH5	578 aa		4.57	□□□□□ -1.68
BBX-223	ENST00000473542	SH3GLB2	Q9NR46	395 aa		4.57	□□□□□ -1.68
BBX-223	ENST00000473542	PADI3	Q9ULW8	664 aa		4.57	□□□□□ -1.68
BBX-223	ENST00000473542	NME7	Q9Y5B8	376 aa		4.57	□□□□□ -1.68
BBX-223	ENST00000473542	PCDHGA5	Q9Y5G8	931 aa		4.57	□□□□□ -1.68
BBX-223	ENST00000473542	PCDHAC2	Q9Y5I4	1007 aa		4.57	□□□□□ -1.68
BBX-223	ENST00000473542	NFS1	Q9Y697	457 aa		4.57	□□□□□ -1.68
BBX-223	ENST00000473542	PTPRC	P08575	1304 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	LILRA5	A6NI73	299 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	DVL1	O14640	695 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	IPO8	O15397	1037 aa	Known RBP	4.56	□□□□□ -1.68
BBX-223	ENST00000473542	TBCA	O75347	108 aa	Known RBP	4.56	□□□□□ -1.68
BBX-223	ENST00000473542	PSMD10	O75832	226 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	KCNK5	O95279	499 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	PRSS2	P07478	247 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	SNHG28	P0DPA3	235 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	SCP2	P22307	547 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	CPT2	P23786	658 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	MATR3	P43243	847 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
BBX-223	ENST00000473542	RGS19	P49795	217 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	PEX5	P50542	639 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	BNC1	Q01954	994 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	TFCP2	Q12800	502 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	TRAF3	Q13114	568 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	PLCB4	Q15147	1175 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	SNAPC1	Q16533	368 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	XKR9	Q5GH70	373 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	PAPPA-AS1	Q5QFB9	102 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	CAMKMT	Q7Z624	323 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	VSIG1	Q86XK7	387 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	GALNT13	Q8IUC8	556 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	SLC5A8	Q8N695	610 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	CFAP61	Q8NHU2	1237 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	SPATA3	Q8NHX4	192 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	TAS1R2	Q8TE23	839 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	UTP15	Q8TED0	518 aa	Known RBP	4.56	□□□□□ -1.68
BBX-223	ENST00000473542	MTERF1	Q99551	399 aa	Known RBP	4.56	□□□□□ -1.68
BBX-223	ENST00000473542	GPR88	Q9GZN0	384 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	ANKZF1	Q9H8Y5	726 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	OLAH	Q9NV23	265 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	TAS2R14	Q9NYV8	317 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	SMARCAL1	Q9NZC9	954 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	WDR35	Q9P2L0	1181 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	TUBE1	Q9UJT0	475 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	KLHL20	Q9Y2M5	609 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	AMDHD2	Q9Y303	409 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	SNX9	Q9Y5X1	595 aa		4.56	□□□□□ -1.68
BBX-223	ENST00000473542	IGLV5-37	A0A075B6J1	123 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	LINC01553	A4QN01	128 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542		J3QR06	171 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	BUD23	O43709	281 aa	Known RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	LINGO3	P0C6S8	592 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	S1PR1	P21453	382 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	NMBR	P28336	390 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	SSTR2	P30874	369 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	PCYT1A	P49585	367 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	CSE1L	P55060	971 aa	Known RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	PDE1B	Q01064	536 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ZNF155	Q12901	538 aa	Predicted RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	MELK	Q14680	651 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	SETMAR	Q53H47	684 aa	Predicted RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ARMC4	Q5T2S8	1044 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	C9orf47	Q6ZRZ4	202 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542		Q75L30	129 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	FJX1	Q86VR8	437 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ZDHHC17	Q8IUH5	632 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	PGBD5	Q8N414	524 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	AFAP1	Q8N556	730 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ZNF114	Q8NC26	417 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ACVR1C	Q8NER5	493 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	OR5R1	Q8NH85	324 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ASB5	Q8WWX0	329 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	PIGT	Q969N2	578 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	HDAC11	Q96DB2	347 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	SPACA9	Q96E40	222 aa	Predicted RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ZNF830	Q96NB3	372 aa	Predicted RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ZNF385A	Q96PM9	386 aa	Known RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	CMKLR1	Q99788	373 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	NTPCR	Q9BSD7	190 aa	Known RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	SLC25A23	Q9BV35	468 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	MRPL44	Q9H9J2	332 aa	Known RBP	4.55	□□□□□ -1.68
BBX-223	ENST00000473542	TMEM30A	Q9NV96	361 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	HAO2	Q9NYQ3	351 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ZNF224	Q9NZL3	707 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	SELENON	Q9NZV5	590 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	SIX4	Q9UIU6	781 aa		4.55	□□□□□ -1.68
BBX-223	ENST00000473542	ANKRD66	B4E2M5	251 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	MID1	O15344	667 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	RECQL5	O94762	991 aa	Predicted RBP	4.54	□□□□□ -1.68
BBX-223	ENST00000473542	HSPA4L	O95757	839 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	BCL10	O95999	233 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	USP8	P40818	1118 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	RAB28	P51157	221 aa		4.54	□□□□□ -1.68
BBX-223	ENST00000473542	SEC61A1	P61619	476 aa	Known RBP	4.54	□□□□□ -1.68
BBX-223	ENST00000473542	SNRPE	P62304	92 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms