RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 IL2P60568 153 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 PRKG2Q13237 762 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 PCBP2Q15366 365 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■■■□□ 17.1
BRCA1-209ENST00000470026 TBC1D25Q3MII6 688 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 GPSM1Q86YR5 675 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 TTC30BQ8N4P2 665 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 SIDT2Q8NBJ9 832 aaKnown RBP13.5□□□□□ -0.25
BRCA1-209ENST00000470026 C12orf43Q96C57 262 aaKnown RBP13.5□□□□□ -0.25
BRCA1-209ENST00000470026 CNDP2Q96KP4 475 aaKnown RBP13.5□□□□□ -0.25
BRCA1-209ENST00000470026 ACOX2Q99424 681 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 TTLL2Q9BWV7 592 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 ACTL8Q9H568 366 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 TLR9Q9NR96 1032 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 NUDT4Q9NZJ9 180 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 EBF1Q9UH73 591 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 EIF2B4Q9UI10 523 aaKnown RBP13.5□□□□□ -0.25
BRCA1-209ENST00000470026 MAGEL2Q9UJ55 1249 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 TRMT6Q9UJA5 497 aaKnown RBP13.5□□□□□ -0.25
BRCA1-209ENST00000470026 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 NEUROG3Q9Y4Z2 214 aa13.5□□□□□ -0.25
BRCA1-209ENST00000470026 IFRD1O00458 451 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 OR4F21O95013 312 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 CDH1P12830 882 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 HUNKP57058 714 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 OR4D2P58180 307 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 SMARCB1Q12824 385 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 CBX2Q14781 532 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 RBBP7Q16576 425 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 TIGD2Q4W5G0 525 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 PYCR3Q53H96 274 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 IFNEQ86WN2 208 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 CLVS1Q8IUQ0 354 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 SFRP1Q8N474 314 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 PDPRQ8NCN5 879 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 EEF1AKMT1Q8WVE0 214 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 RMDN1Q96DB5 314 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 LINGO1Q96FE5 620 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 CHID1Q9BWS9 393 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 OSBPL6Q9BZF3 934 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 NTN4Q9HB63 628 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 SUN2Q9UH99 717 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 FKBPLQ9UIM3 349 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 SLC27A5Q9Y2P5 690 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 ZFP37Q9Y6Q3 630 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 ILVBLA1L0T0 632 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 NCF1BA6NI72 391 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 NCF1CA8MVU1 366 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 PFDN6O15212 129 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 OR1I1O60431 355 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 SYNCRIPO60506 623 aaKnown RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 TULP3O75386 442 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 ESR1P03372 595 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 NCF1P14598 390 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 MC4RP32245 332 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 HLCSP50747 726 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 SCNN1BP51168 640 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 OXCT1P55809 520 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 MBTPS1Q14703 1052 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 TGFBIQ15582 683 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 FUT11Q495W5 492 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 ATP6AP1LQ52LC2 224 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 FAM171A1Q5VUB5 890 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 LETMD1Q6P1Q0 360 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 SCIMPQ6UWF3 145 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 RSPO2Q6UXX9 243 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 CROCCP3Q8IVE0 287 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 LRRC43Q8N309 656 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 TERB1Q8NA31 727 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 OR52B6Q8NGF0 335 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 PNPT1Q8TCS8 783 aaKnown RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 CYGBQ8WWM9 190 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 RPL10LQ96L21 214 aaKnown RBP13.49□□□□□ -0.25
BRCA1-209ENST00000470026 BDH2Q9BUT1 245 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 C1orf50Q9BV19 199 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 GPR62Q9BZJ7 368 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 P2RY12Q9H244 342 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 SCUBE2Q9NQ36 999 aa13.49□□□□□ -0.25
BRCA1-209ENST00000470026 ANKRD66B4E2M5 251 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CPNE6O95741 557 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CLIC3O95833 236 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 PTGER3P43115 390 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CLCN7P51798 805 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 PMS2P3Q13401 168 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 MYBPC3Q14896 1274 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 KIAA0040Q15053 153 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CCNYL2Q5T2Q4 361 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 SLC2A7Q6PXP3 512 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 TBPL2Q6SJ96 375 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 RNF19BQ6ZMZ0 732 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 RNF165Q6ZSG1 346 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CDYL2Q8N8U2 506 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 FNDC5Q8NAU1 212 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 ESAMQ96AP7 390 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 SMIM14Q96QK8 99 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CDK5RAP1Q96SZ6 601 aaKnown RBP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 TUBA1CQ9BQE3 449 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CXorf21Q9HAI6 301 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms