RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CHST12Q9NRB3 414 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 SPEF1Q9Y4P9 236 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 TRPC5OSA6NMA1 111 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 B4GAT1O43505 415 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 GJB3O75712 270 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 UPK1BO75841 260 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 SOAT2O75908 522 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 KCNK2O95069 426 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 ASGR1P07306 291 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 SLC1A2P43004 574 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 ZNF470Q6ECI4 717 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 NEK5Q6P3R8 708 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 HACD2Q6Y1H2 254 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 SPATA2LQ8IUW3 424 aaPredicted RBP17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 POC5Q8NA72 575 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 RHOXF1Q8NHV9 184 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 PHF10Q8WUB8 498 aaKnown RBP17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 ZIC5Q96T25 663 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 VAT1Q99536 393 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 PKMYT1Q99640 499 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 CHID1Q9BWS9 393 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 CAB39Q9Y376 341 aaPredicted RBP17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 UGT2A1Q9Y4X1 527 aa17.89■□□□□ 0.45
SNAPC3-205ENST00000467062 TPST1O60507 370 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 APOA4P06727 396 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 CCR1P32246 355 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 GRK3P35626 688 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 CRHR2Q13324 411 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 ZNF181Q2M3W8 571 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 LIPMQ5VYY2 423 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 LYSMD2Q8IV50 215 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 B3GALT6Q96L58 329 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 DEPDC7Q96QD5 511 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 RHOJQ9H4E5 214 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 KCNN3Q9UGI6 736 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 HS3ST4Q9Y661 456 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 SAGE2PA6NJ88 616 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 J3KR12 359 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 MRASO14807 208 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 DLX3O60479 287 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 SNAP29O95721 258 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 HNRNPLP14866 589 aaKnown RBP eCLIP17.88■□□□□ 0.457e-13■■■■■ 49.6
SNAPC3-205ENST00000467062 PLK1P53350 603 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 FCHO2Q0JRZ9 810 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 HSPA14Q0VDF9 509 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 PUS10Q3MIT2 529 aaKnown RBP17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 PCID2Q5JVF3 399 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 RBM20Q5T481 1227 aaKnown RBP17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 ARTNQ5T4W7 220 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 CNSTQ6PJW8 725 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 SLC51BQ86UW2 128 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 CCDC28AQ8IWP9 274 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 HDAC10Q969S8 669 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 MUL1Q969V5 352 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 ELMO2Q96JJ3 720 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 ADNPQ9H2P0 1102 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 CYP4F12Q9HCS2 524 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 ABCB10Q9NRK6 738 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 GIMAP4Q9NUV9 329 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 PRG3Q9Y2Y8 225 aaPredicted RBP17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 Q9Y3F1 56 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 MAU2Q9Y6X3 613 aa17.88■□□□□ 0.45
SNAPC3-205ENST00000467062 A0A0U1RQF3 1178 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 FAM95CA0A1B0GW59 222 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 B8ZZF3 427 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 AP3B1O00203 1094 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 GPC4O75487 556 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 PTTG1O95997 202 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 CCNCP24863 283 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 SLC7A2P52569 658 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 TAS2R39P59534 338 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 MGAT3Q09327 533 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 CCDC103Q8IW40 242 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 TTC9BQ8N6N2 239 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 RDH11Q8TC12 318 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 DGCR6LQ9BY27 220 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 OSBPL2Q9H1P3 480 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 HPS4Q9NQG7 708 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 NECTIN3Q9NQS3 549 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 DDX28Q9NUL7 540 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 NPAP1Q9NZP6 1156 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 AAR2Q9Y312 384 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 PCDHGA8Q9Y5G5 932 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 E9PAM4 449 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 MATN3O15232 486 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 SEC24AO95486 1093 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 IGLV3-25P01717 112 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 SNRPB2P08579 225 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 CRHBPP24387 322 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 HOXD10P28358 340 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 EIF2DP41214 584 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 KRR1Q13601 381 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 FASTKQ14296 549 aaKnown RBP17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 SQLEQ14534 574 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 IHHQ14623 411 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 NPTX1Q15818 432 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 KCNA10Q16322 511 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 RASAL3Q86YV0 1011 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 TRPV3Q8NET8 790 aa17.87■□□□□ 0.45
SNAPC3-205ENST00000467062 TTC9Q92623 222 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms