RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 CEP41Q9BYV8 373 aa11.75□□□□□ -0.53
GTF3A-205ENST00000466776 RAB33BQ9H082 229 aa11.75□□□□□ -0.53
GTF3A-205ENST00000466776 TRABDQ9H4I3 376 aa11.75□□□□□ -0.53
GTF3A-205ENST00000466776 ZNHIT6Q9NWK9 470 aaKnown RBP11.75□□□□□ -0.53
GTF3A-205ENST00000466776 OGFRQ9NZT2 677 aa11.75□□□□□ -0.53
GTF3A-205ENST00000466776 SCHIP1Q9P0W5 487 aaPredicted RBP11.75□□□□□ -0.53
GTF3A-205ENST00000466776 ZNF624Q9P2J8 865 aaPredicted RBP11.75□□□□□ -0.53
GTF3A-205ENST00000466776 EPHA6Q9UF33 1036 aa11.75□□□□□ -0.53
GTF3A-205ENST00000466776 PADI1Q9ULC6 663 aa11.75□□□□□ -0.53
GTF3A-205ENST00000466776 TP53TG5Q9Y2B4 290 aa11.75□□□□□ -0.53
GTF3A-205ENST00000466776 KCNMB2Q9Y691 235 aa11.75□□□□□ -0.53
GTF3A-205ENST00000466776 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 C21orf140B9A014 251 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 AKR1B10O60218 316 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 MTX2O75431 263 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 RECKO95980 971 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 KRT1P04264 644 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 TPM1P09493 284 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 TMEM253P0C7T8 217 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 ZNF28P17035 718 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 BPIP17213 487 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 LEPRP48357 1165 aaKnown RBP11.74□□□□□ -0.53
GTF3A-205ENST00000466776 SH3BP2P78314 561 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 SRSF1Q07955 248 aaKnown RBP eCLIP11.74□□□□□ -0.53
GTF3A-205ENST00000466776 TMEM115Q12893 351 aaPredicted RBP11.74□□□□□ -0.53
GTF3A-205ENST00000466776 TRIM14Q14142 442 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 ERV3-1Q14264 604 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 GPR18Q14330 331 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 TCTN3Q6NUS6 607 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 FAM92BQ6ZTR7 304 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 LUZP1Q86V48 1076 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 RHOT2Q8IXI1 618 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 SIDT2Q8NBJ9 832 aaKnown RBP11.74□□□□□ -0.53
GTF3A-205ENST00000466776 RSC1A1Q92681 617 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 EID2BQ96D98 161 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 ELMO2Q96JJ3 720 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 FCRL4Q96PJ5 515 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 TWSG1Q9GZX9 223 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 GLOD4Q9HC38 313 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 SLC40A1Q9NP59 571 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 DDX56Q9NY93 547 aaKnown RBP11.74□□□□□ -0.53
GTF3A-205ENST00000466776 HACD3Q9P035 362 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 SLC23A2Q9UGH3 650 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 RARRES3Q9UL19 164 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 MRPS18BQ9Y676 258 aaKnown RBP11.74□□□□□ -0.53
GTF3A-205ENST00000466776 SLC30A1Q9Y6M5 507 aa11.74□□□□□ -0.53
GTF3A-205ENST00000466776 TNRC6AQ8NDV7 1962 aaKnown RBP11.74□□□□□ -0.53
GTF3A-205ENST00000466776 COL12A1Q99715 3063 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 SSU72P8A0A1W2PR75 194 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 PIPSLA2A3N6 862 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 CDC14CA4D256 554 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 OR52A4PA6NMU1 304 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 MTSS1O43312 755 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 PMPCBO75439 489 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 SPAG6O75602 509 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 CREG1O75629 220 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 NELFEP18615 380 aaKnown RBP11.73□□□□□ -0.53
GTF3A-205ENST00000466776 HNRNPH3P31942 346 aaKnown RBP11.73□□□□□ -0.53
GTF3A-205ENST00000466776 HMGCLP35914 325 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 SPAM1P38567 509 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 NR2C2P49116 596 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 DRG2P55039 364 aaKnown RBP11.73□□□□□ -0.53
GTF3A-205ENST00000466776 DYNLT1P63172 113 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 PDE1BQ01064 536 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 ACY1Q03154 408 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 TUBB3Q13509 450 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 DNASE1L3Q13609 305 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 ITGA9Q13797 1035 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 PLCL1Q15111 1095 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 PPP2R5EQ16537 467 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 TEX44Q53QW1 395 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 LDLRAP1Q5SW96 308 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 ATP1A1-AS1Q5TC04 95 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 LRRC38Q5VT99 294 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 AMZ2Q86W34 360 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 KMT5CQ86Y97 462 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 CPNE8Q86YQ8 564 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 FAM26EQ8N5C1 309 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 SLC35G2Q8TBE7 412 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 DTX3LQ8TDB6 740 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 KLHL6Q8WZ60 621 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 OLFM3Q96PB7 478 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 CD180Q99467 661 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 LHX9Q9NQ69 397 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 IFNKQ9P0W0 207 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 TRIM10Q9UDY6 481 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 FAM153AQ9UHL3 310 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 NENFQ9UMX5 172 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 MAN2B2Q9Y2E5 1009 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 PCDHGA6Q9Y5G7 932 aa11.73□□□□□ -0.53
GTF3A-205ENST00000466776 FLNCQ14315 2725 aa11.72□□□□□ -0.53
GTF3A-205ENST00000466776 SYCE3A1L190 88 aa11.72□□□□□ -0.53
GTF3A-205ENST00000466776 KLHL33A6NCF5 533 aa11.72□□□□□ -0.53
GTF3A-205ENST00000466776 CYSRT1A8MQ03 144 aa11.72□□□□□ -0.53
GTF3A-205ENST00000466776 MT-CYBP00156 380 aaPredicted RBP11.72□□□□□ -0.53
GTF3A-205ENST00000466776 BRAFP15056 766 aa11.72□□□□□ -0.53
GTF3A-205ENST00000466776 FECHP22830 423 aa11.72□□□□□ -0.53
GTF3A-205ENST00000466776 F8A1P23610 371 aa11.72□□□□□ -0.53
GTF3A-205ENST00000466776 SLC1A1P43005 524 aa11.72□□□□□ -0.53
GTF3A-205ENST00000466776 PMS2P54278 862 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms