RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 VILLO15195 856 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 IPO8O15397 1037 aaKnown RBP3.98□□□□□ -1.77
ITGB1-208ENST00000464001 WDR1O75083 606 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 TFP02787 698 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 URODP06132 367 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 THEGLP0DJG4 465 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 MYOD1P15172 320 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 PAX1P15863 534 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 DESP17661 470 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 ATP5DP30049 168 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 SHMT1P34896 483 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 GGT5P36269 586 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 ARL3P36405 182 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 PGM1P36871 562 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 CDH15P55291 814 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 PSMC6P62333 389 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 UBXN1Q04323 297 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 C17orf67Q0P5P2 114 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 MAMLD1Q13495 774 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 GTF2H2Q13888 395 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 PPA1Q15181 289 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 NFIL3Q16649 462 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 BMP2KLQ5H9B9 411 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 ARMC4Q5T2S8 1044 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 GGNBP1Q5YKI7 109 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF772Q68DY9 489 aaPredicted RBP3.98□□□□□ -1.77
ITGB1-208ENST00000464001 GPR139Q6DWJ6 353 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 GTF2H2CQ6P1K8 395 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 ARHGAP11AQ6P4F7 1023 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 TMEM81Q6P7N7 255 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 FBXO46Q6PJ61 603 aaPredicted RBP3.98□□□□□ -1.77
ITGB1-208ENST00000464001 CNSTQ6PJW8 725 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 RAPH1Q70E73 1250 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 NLRP14Q86W24 1093 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 DHX40Q8IX18 779 aaKnown RBP3.98□□□□□ -1.77
ITGB1-208ENST00000464001 ADSSL1Q8N142 457 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 NUP93Q8N1F7 819 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 ELP4Q96EB1 424 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 FNBP1Q96RU3 617 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 PI4K2AQ9BTU6 479 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 MOV10L1Q9BXT6 1211 aaKnown RBP3.98□□□□□ -1.77
ITGB1-208ENST00000464001 FTOQ9C0B1 505 aaKnown RBP eCLIP3.98□□□□□ -1.77
ITGB1-208ENST00000464001 TSPY26PQ9H489 355 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 BRF2Q9HAW0 419 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 HCN3Q9P1Z3 774 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 RASAL2Q9UJF2 1139 aa3.98□□□□□ -1.77
ITGB1-208ENST00000464001 SYNRGQ9UMZ2 1314 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 IGKV3D-15A0A087WSY6 115 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TBX10O75333 385 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TACC1O75410 805 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 ATP5BP06576 529 aaKnown RBP3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TUBBP07437 444 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF883P0CG24 379 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 LAMP2P13473 410 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 CORO1AP31146 461 aaKnown RBP3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TUBB4BP68371 445 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 UBXN2AP68543 259 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 IL1RL1Q01638 556 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TFCP2Q12800 502 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 PRPF4BQ13523 1007 aaKnown RBP3.97□□□□□ -1.77
ITGB1-208ENST00000464001 GPR68Q15743 365 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 C2orf68Q2NKX9 166 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 PARP10Q53GL7 1025 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 KRTCAP3Q53RY4 240 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF766Q5HY98 468 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 FAM69AQ5T7M9 428 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TXNDC8Q6A555 127 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 SLC35E4Q6ICL7 350 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 DCLRE1AQ6PJP8 1040 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 ATF7IPQ6VMQ6 1270 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 ASB18Q6ZVZ8 466 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 LRRC8DQ7L1W4 858 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 RRM2BQ7LG56 351 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TDRPQ86YL5 185 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TAGAPQ8N103 731 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 ZNF619Q8N2I2 560 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 C17orf53Q8N3J3 647 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-208ENST00000464001 OTUD6BQ8N6M0 293 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 HUS1BQ8NHY5 278 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 APOPT1Q96IL0 206 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 TSGA13Q96PP4 275 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 CMKLR1Q99788 373 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 INTS2Q9H0H0 1204 aaKnown RBP3.97□□□□□ -1.77
ITGB1-208ENST00000464001 PDCL3Q9H2J4 239 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 PPP1R3EQ9H7J1 279 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 PDE7BQ9NP56 450 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 MMP25Q9NPA2 562 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 HINT3Q9NQE9 182 aaKnown RBP3.97□□□□□ -1.77
ITGB1-208ENST00000464001 C20orf141Q9NUB4 165 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 HCFC1R1Q9NWW0 138 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 DCAF16Q9NXF7 216 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 ERVK-11Q9UQG0 969 aa3.97□□□□□ -1.77
ITGB1-208ENST00000464001 A0A1B0GU03 582 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 GAGE10A6NGK3 116 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 ADAM20O43506 726 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 TSPAN9O75954 239 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 TBX6O95947 436 aaPredicted RBP3.96□□□□□ -1.78
ITGB1-208ENST00000464001 F9P00740 461 aa3.96□□□□□ -1.78
ITGB1-208ENST00000464001 CLEC3BP05452 202 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms