RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 BRAFP15056 766 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 IL4RP24394 825 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 HSD11B2P80365 405 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 LAMB3Q13751 1172 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 KRT81Q14533 505 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 QPCTQ16769 361 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 ZRANB3Q5FWF4 1079 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 C1QL3Q5VWW1 255 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 ALS2CLQ60I27 953 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 PDPK2PQ6A1A2 396 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 MED25Q71SY5 747 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 IQCKQ8N0W5 287 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 SLC34A3Q8N130 599 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 RBMXL3Q8N7X1 1067 aaKnown RBP14.19□□□□□ -0.14
SMC1A-204ENST00000463684 TMEM102Q8N9M5 508 aaPredicted RBP14.19□□□□□ -0.14
SMC1A-204ENST00000463684 ARRDC2Q8TBH0 407 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 TEKT4Q8WW24 435 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 MAML1Q92585 1016 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 GLYATL1Q969I3 302 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 ZNF653Q96CK0 615 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 SNRNP40Q96DI7 357 aaKnown RBP14.19□□□□□ -0.14
SMC1A-204ENST00000463684 C19orf60Q96EN9 201 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 ERGIC2Q96RQ1 377 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 NUDT9Q9BW91 350 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 NUP62CLQ9H1M0 184 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 ZFYVE1Q9HBF4 777 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 PCDH18Q9HCL0 1135 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 KCND1Q9NSA2 647 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 GPR83Q9NYM4 423 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 MYO1AQ9UBC5 1043 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 RP1L1Q8IWN7 2480 aaPredicted RBP14.19□□□□□ -0.14
SMC1A-204ENST00000463684 CACNA1DQ01668 2161 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 ESPL1Q14674 2120 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TNRC6AQ8NDV7 1962 aaKnown RBP14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TEP1Q99973 2627 aaKnown RBP14.18□□□□□ -0.14
SMC1A-204ENST00000463684 GZMAP12544 262 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TCF4P15884 667 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 FECHP22830 423 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 CCNCP24863 283 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 RRADP55042 308 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 GSDMDP57764 484 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 PPP1CAP62136 330 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TUBB4BP68371 445 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 NIPAL4Q0D2K0 466 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TUBB2AQ13885 445 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 IFI16Q16666 785 aaKnown RBP14.18□□□□□ -0.14
SMC1A-204ENST00000463684 DNTTIP2Q5QJE6 756 aaKnown RBP14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TMTC4Q5T4D3 741 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TRAM1L1Q8N609 369 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 GPR26Q8NDV2 337 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 OR8K5Q8NH50 307 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 ADAMTS17Q8TE56 1095 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 MOCOSQ96EN8 888 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TRIM11Q96F44 468 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 MAP3K3Q99759 626 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 SYT11Q9BT88 431 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 TUBB2BQ9BVA1 445 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 CHST8Q9H2A9 424 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 DTLQ9NZJ0 730 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 LIMA1Q9UHB6 759 aaKnown RBP14.18□□□□□ -0.14
SMC1A-204ENST00000463684 LRBAP50851 2863 aa14.18□□□□□ -0.14
SMC1A-204ENST00000463684 ANKUB1A6NFN9 424 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 RAB40ALP0C0E4 278 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 MYBL1P10243 752 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 CDK11BP21127 795 aaKnown RBP14.17□□□□□ -0.14
SMC1A-204ENST00000463684 VAV2P52735 878 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 DCDC1P59894 354 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 GALNT2Q10471 571 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 GPS2Q13227 327 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 PIGHQ14442 188 aaPredicted RBP14.17□□□□□ -0.14
SMC1A-204ENST00000463684 PLCL1Q15111 1095 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 CERS6Q6ZMG9 384 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 ZNF517Q6ZMY9 492 aaPredicted RBP14.17□□□□□ -0.14
SMC1A-204ENST00000463684 D2HGDHQ8N465 521 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 TTC30BQ8N4P2 665 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 CISD2Q8N5K1 135 aaKnown RBP14.17□□□□□ -0.14
SMC1A-204ENST00000463684 ENDOVQ8N8Q3 282 aaKnown RBP14.17□□□□□ -0.14
SMC1A-204ENST00000463684 GLIS1Q8NBF1 620 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 FATE1Q969F0 183 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 CD180Q99467 661 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 SMAD5Q99717 465 aaKnown RBP14.17□□□□□ -0.14
SMC1A-204ENST00000463684 NUP85Q9BW27 656 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 NLNQ9BYT8 704 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 ASF1BQ9NVP2 202 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 TMEM63CQ9P1W3 806 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 C5AR2Q9P296 337 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 TCFL5Q9UL49 500 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 MYO6Q9UM54 1294 aa14.17□□□□□ -0.14
SMC1A-204ENST00000463684 PRRC2CQ9Y520 2896 aaKnown RBP14.16□□□□□ -0.14
SMC1A-204ENST00000463684 TLCD2A6NGC4 264 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 MFSD11O43934 449 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 KCNJ13O60928 360 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 MTX2O75431 263 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 HLA-DQB2P05538 268 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 CD86P42081 329 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 ITGA1P56199 1179 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 RIPPLY3P57055 190 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 MMRN1Q13201 1228 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 RAPSNQ13702 412 aa14.16□□□□□ -0.14
SMC1A-204ENST00000463684 GTF2H3Q13889 308 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms