RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TRBC1P01850 177 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 HSP90AA1P07900 732 aaKnown RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 RAB40ALP0C0E4 278 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 ERCC2P18074 760 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 ITGA3P26006 1051 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 HSPA9P38646 679 aaKnown RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 GDF10P55107 478 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 JAM2P57087 298 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 RPL7AP62424 266 aaKnown RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 TUBB3Q13509 450 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 DPYSQ14117 519 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 MAN2A1Q16706 1144 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 VWA5B1Q5TIE3 1220 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 FAM69BQ5VUD6 431 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 ALG1LQ6GMV1 187 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 LCN10Q6JVE6 187 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 FAM198BQ6UWH4 519 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 CERS6Q6ZMG9 384 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 RFX8Q6ZV50 586 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 USP45Q70EL2 814 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 CISD2Q8N5K1 135 aaKnown RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 ZBTB2Q8N680 514 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 TMEM102Q8N9M5 508 aaPredicted RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 UBE2Q2Q8WVN8 375 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 LURAP1Q96LR2 239 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 LRFN5Q96NI6 719 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 LYSMD1Q96S90 227 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 PEBP4Q96S96 227 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 EIF3CQ99613 913 aaKnown RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 CNPY3Q9BT09 278 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 RIOK2Q9BVS4 552 aaKnown RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 STK33Q9BYT3 514 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 CARD9Q9H257 536 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 GANQ9H2C0 597 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 NDST4Q9H3R1 872 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 SLC40A1Q9NP59 571 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 GPATCH2LQ9NWQ4 482 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 GPR83Q9NYM4 423 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 ZNHIT2Q9UHR6 403 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 HOOK1Q9UJC3 728 aaKnown RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 AP4E1Q9UPM8 1137 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 FARSAQ9Y285 508 aaKnown RBP7.57□□□□□ -1.2
SMC3-202ENST00000462899 B3GNT3Q9Y2A9 372 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 PCDHGA11Q9Y5H2 935 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 ATP6V1DQ9Y5K8 247 aa7.57□□□□□ -1.2
SMC3-202ENST00000462899 DFFAO00273 331 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 EEF2KO00418 725 aaKnown RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 GRID2O43424 1007 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 MAFKO60675 156 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 SNX2O60749 519 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 CPNE3O75131 537 aaKnown RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 RASSF9O75901 435 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 PRLP01236 227 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 JCHAINP01591 159 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 EBLN1P0CF75 366 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 CTPS1P17812 591 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 HNRNPH3P31942 346 aaKnown RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 RORAP35398 523 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 PPM1FP49593 454 aaPredicted RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 RNF144AP50876 292 aaPredicted RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 VAV2P52735 878 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 MAXP61244 160 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 RPS15P62841 145 aaKnown RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 GPR18Q14330 331 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 KCNAB1Q14722 419 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 ARMC12Q5T9G4 340 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 CACHD1Q5VU97 1274 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 SP5Q6BEB4 398 aaPredicted RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 SCYL2Q6P3W7 929 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 CYB5D1Q6P9G0 228 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 ABRAXAS1Q6UWZ7 409 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 TRIM72Q6ZMU5 477 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 Q6ZS92 163 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 FAM92BQ6ZTR7 304 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 MED25Q71SY5 747 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 CUZD1Q86UP6 607 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 DSELQ8IZU8 1212 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 D2HGDHQ8N465 521 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 ENDOVQ8N8Q3 282 aaKnown RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 ZNF501Q96CX3 271 aaPredicted RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 ZNF514Q96K75 400 aaPredicted RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 MCEEQ96PE7 176 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 SNRNP25Q9BV90 132 aaKnown RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 SELENOOQ9BVL4 669 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 CHST8Q9H2A9 424 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 PDE7BQ9NP56 450 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 WASH6PQ9NQA3 447 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 LATS2Q9NRM7 1088 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 FAM207AQ9NSI2 230 aaPredicted RBP7.56□□□□□ -1.2
SMC3-202ENST00000462899 POT1Q9NUX5 634 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 ATXN10Q9UBB4 475 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 SLC23A2Q9UGH3 650 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 RARRES3Q9UL19 164 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 TCFL5Q9UL49 500 aa7.56□□□□□ -1.2
SMC3-202ENST00000462899 ZNF185O15231 689 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 LRRTM2O43300 516 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZG16O60844 167 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ASMTLO95671 621 aa7.55□□□□□ -1.2
SMC3-202ENST00000462899 ZNF8P17098 575 aaPredicted RBP7.55□□□□□ -1.2
SMC3-202ENST00000462899 PTGER4P35408 488 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms