RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 RP1L1Q8IWN7 2480 aaPredicted RBP21.52■■□□□ 1.04
HMG20B-207ENST00000461099 TIAF1O95411 115 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 PDGFAP04085 211 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 VCLP18206 1134 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 CDK18Q07002 472 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 SEMA5AQ13591 1074 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 PCSK7Q16549 785 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 FAM182AQ5T1J6 154 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 ZFYVE27Q5T4F4 411 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 PWWP2BQ6NUJ5 590 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 RAPGEF5Q92565 580 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 AGAP3Q96P47 875 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 FCRL4Q96PJ5 515 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 CEP41Q9BYV8 373 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 ACTL8Q9H568 366 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 CTTNBP2NLQ9P2B4 639 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 TMPRSS11EQ9UL52 423 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 WDR37Q9Y2I8 494 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 HEY1Q9Y5J3 304 aa21.52■■□□□ 1.04
HMG20B-207ENST00000461099 IGHV5-51A0A0C4DH38 117 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 VPS4BO75351 444 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 KDELR1P24390 212 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 ZBED6P86452 979 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 AP1B1Q10567 949 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 TMEM115Q12893 351 aaPredicted RBP21.51■■□□□ 1.03
HMG20B-207ENST00000461099 TUBB3Q13509 450 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 C11orf96Q7Z7L8 435 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 TRAPPC5Q8IUR0 188 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 PLD5Q8N7P1 536 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 SIDT2Q8NBJ9 832 aaKnown RBP21.51■■□□□ 1.03
HMG20B-207ENST00000461099 SEC14L1Q92503 715 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 UBXN4Q92575 508 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 TADA1Q96BN2 335 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 SLC41A2Q96JW4 573 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 VPS35Q96QK1 796 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 GPR87Q9BY21 358 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 XPO4Q9C0E2 1151 aaKnown RBP21.51■■□□□ 1.03
HMG20B-207ENST00000461099 SLC25A51Q9H1U9 297 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 TMEM63CQ9P1W3 806 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 UVRAGQ9P2Y5 699 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 RARRES3Q9UL19 164 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 VPS4AQ9UN37 437 aa21.51■■□□□ 1.03
HMG20B-207ENST00000461099 NBPF19A0A087WUL8 3843 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 TTLL8A6PVC2 850 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 DNAJB5O75953 348 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 FOLR1P15328 257 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 HALP42357 657 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 PPP1CAP62136 330 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 BPHLQ86WA6 291 aaPredicted RBP21.5■■□□□ 1.03
HMG20B-207ENST00000461099 CPLX3Q8WVH0 158 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 SRPK1Q96SB4 655 aaKnown RBP21.5■■□□□ 1.03
HMG20B-207ENST00000461099 TRIM55Q9BYV6 548 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 AKIRIN1Q9H9L7 192 aaPredicted RBP21.5■■□□□ 1.03
HMG20B-207ENST00000461099 CAPN11Q9UMQ6 739 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 ICE1Q9Y2F5 2266 aa21.5■■□□□ 1.03
HMG20B-207ENST00000461099 PRRC2CQ9Y520 2896 aaKnown RBP21.5■■□□□ 1.03
HMG20B-207ENST00000461099 AURKAO14965 403 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 KCNJ13O60928 360 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 FECHP22830 423 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 PTPN4P29074 926 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 PBX1P40424 430 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 UQCRFS1P47985 274 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 KCNAB1Q14722 419 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 SLC14A2Q15849 920 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 UGT8Q16880 541 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 ATP13A5Q4VNC0 1218 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 CCDC70Q6NSX1 233 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 KLHL35Q6PF15 583 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 EFCAB3Q8N7B9 438 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 GALNT11Q8NCW6 608 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 SPATA22Q8NHS9 363 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 GDAP1Q8TB36 358 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 BRSK1Q8TDC3 778 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 THAP4Q8WY91 577 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 CBX8Q9HC52 389 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 BPIFA1Q9NP55 256 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 LCMT1Q9UIC8 334 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 NENFQ9UMX5 172 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 NOTCH2Q04721 2471 aa21.49■■□□□ 1.03
HMG20B-207ENST00000461099 ZNF487B1APH4 448 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 NDST3O95803 873 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 MT-CYBP00156 380 aaPredicted RBP21.48■■□□□ 1.03
HMG20B-207ENST00000461099 ACY1Q03154 408 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 GTF2H3Q13889 308 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 IQCB1Q15051 598 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 PDK1Q15118 436 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 CAPRIN2Q6IMN6 1127 aaKnown RBP21.48■■□□□ 1.03
HMG20B-207ENST00000461099 FAM199XQ6PEV8 388 aaPredicted RBP21.48■■□□□ 1.03
HMG20B-207ENST00000461099 CPT1CQ8TCG5 803 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 TTC25Q96NG3 672 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 RUFY1Q96T51 708 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 SPO11Q9Y5K1 396 aa21.48■■□□□ 1.03
HMG20B-207ENST00000461099 TNRC6AQ8NDV7 1962 aaKnown RBP21.48■■□□□ 1.03
HMG20B-207ENST00000461099 LRRD1A4D1F6 860 aa21.47■■□□□ 1.03
HMG20B-207ENST00000461099 AGFG2O95081 481 aa21.47■■□□□ 1.03
HMG20B-207ENST00000461099 H2AFZP0C0S5 128 aa21.47■■□□□ 1.03
HMG20B-207ENST00000461099 GNLYP22749 145 aa21.47■■□□□ 1.03
HMG20B-207ENST00000461099 PGDP52209 483 aa21.47■■□□□ 1.03
HMG20B-207ENST00000461099 RPS15P62841 145 aaKnown RBP21.47■■□□□ 1.03
HMG20B-207ENST00000461099 DMPKQ09013 629 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 316.4 ms