RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 PALMO75781 387 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 BBOX1O75936 387 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 PGM3O95394 542 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 PRSS2P07478 247 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 ACAA1P09110 424 aaPredicted RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 FAM90A13PP0C7W8 464 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 FAM90A24PP0C7X0 464 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 SNHG28P0DPA3 235 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 TOP1P11387 765 aaKnown RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 ZNF12P17014 697 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 CDH2P19022 906 aaPredicted RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 TM4SF1P30408 202 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 STX2P32856 288 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 KRT2P35908 639 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 AMPHP49418 695 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 SULT1E1P49888 294 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 ZNF41P51814 821 aaPredicted RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 RAD23AP54725 363 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 FOXG1P55316 489 aaPredicted RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 SLC26A5P58743 744 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 DDR1Q08345 913 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 CBX3Q13185 183 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 DHX34Q14147 1143 aaKnown RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 DUSP28Q4G0W2 176 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 CDONQ4KMG0 1287 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 TCP11X2Q5H9J9 407 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 PPP6R3Q5H9R7 873 aaPredicted RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 CCDC183Q5T5S1 534 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 GKAP1Q5VSY0 366 aaPredicted RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 TAF3Q5VWG9 929 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 METTL2BQ6P1Q9 378 aaKnown RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 KLHL35Q6PF15 583 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 FIP1L1Q6UN15 594 aaKnown RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 LPCAT2Q7L5N7 544 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 PIWIL3Q7Z3Z3 882 aaKnown RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 METTL23Q86XA0 190 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 FOXRED2Q8IWF2 684 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 DSELQ8IZU8 1212 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 PGBD5Q8N414 524 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 IQCF1Q8N6M8 205 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 DENND6BQ8NEG7 585 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 GRK7Q8WTQ7 553 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 SCFD2Q8WU76 684 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 TMED6Q8WW62 240 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 SHC3Q92529 594 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 WASF1Q92558 559 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 PHF21BQ96EK2 531 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 SIPA1Q96FS4 1042 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 METTL2AQ96IZ6 378 aaKnown RBP3.35□□□□□ -1.87
VPS8-215ENST00000460158 CNDP1Q96KN2 507 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 C1orf74Q96LT6 269 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 CCDC114Q96M63 670 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 AK8Q96MA6 479 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 CMTM3Q96MX0 182 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 TCHPQ9BT92 498 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 WACQ9BTA9 647 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 PDZD7Q9H5P4 517 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 PPP1R3EQ9H7J1 279 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 NOX4Q9NPH5 578 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 SLC35C2Q9NQQ7 365 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 RRP7BPQ9NSQ0 103 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 OCIAD1Q9NX40 245 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 ITM2BQ9Y287 266 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 LYVE1Q9Y5Y7 322 aa3.35□□□□□ -1.87
VPS8-215ENST00000460158 A0A0U1RQJ8 604 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 CLRN2A0PK11 232 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 MYO1GB0I1T2 1018 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 BTBD18B2RXH4 712 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 H0YAE9 185 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 SGK1O00141 431 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 AP3B1O00203 1094 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 CACNB4O00305 520 aaPredicted RBP3.34□□□□□ -1.87
VPS8-215ENST00000460158 SOCS6O14544 535 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 WDR46O15213 610 aaKnown RBP3.34□□□□□ -1.87
VPS8-215ENST00000460158 RIPK2O43353 540 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 SMAD6O43541 496 aaKnown RBP3.34□□□□□ -1.87
VPS8-215ENST00000460158 TBX10O75333 385 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 SLC25A12O75746 678 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 DDHD2O94830 711 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 GGPS1O95749 300 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 NGFRP08138 427 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 GCH1P30793 250 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 TLX1P31314 330 aaPredicted RBP3.34□□□□□ -1.87
VPS8-215ENST00000460158 STIP1P31948 543 aaKnown RBP3.34□□□□□ -1.87
VPS8-215ENST00000460158 TCF7P36402 384 aaPredicted RBP3.34□□□□□ -1.87
VPS8-215ENST00000460158 LMAN1P49257 510 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 THBS3P49746 956 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 PDLIM4P50479 330 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 EGR4Q05215 589 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 LTBQ06643 244 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 ACTN3Q08043 901 aaPredicted RBP3.34□□□□□ -1.87
VPS8-215ENST00000460158 FHL1Q13642 323 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 NFE2L1Q14494 772 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 MORF4L2Q15014 288 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 PPP1R7Q15435 360 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 KYNUQ16719 465 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 KRT24Q2M2I5 525 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 SMU1Q2TAY7 513 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 AMZ1Q400G9 498 aa3.34□□□□□ -1.87
VPS8-215ENST00000460158 CEP55Q53EZ4 464 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms