RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PANX3Q96QZ0 392 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 PHOX2BQ99453 314 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 SERPINI1Q99574 410 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 REPIN1Q9BWE0 567 aaKnown RBP6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 ZNF416Q9BWM5 594 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 CHID1Q9BWS9 393 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 BCL2L14Q9BZR8 327 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 SLC13A1Q9BZW2 595 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 STN1Q9H668 368 aaKnown RBP6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 TM9SF3Q9HD45 589 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 AKIP1Q9NQ31 210 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 KLHL1Q9NR64 748 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 UFSP2Q9NUQ7 469 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 CCDC59Q9P031 241 aaKnown RBP6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 TRPS1Q9UHF7 1281 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 GPN3Q9UHW5 284 aaPredicted RBP6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 CYTH4Q9UIA0 394 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 HCN2Q9UL51 889 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 ACSL5Q9ULC5 683 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 PHTF1Q9UMS5 762 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 PSMD13Q9UNM6 376 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 KCNK7Q9Y2U2 307 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 GRIP1Q9Y3R0 1128 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 AP4B1Q9Y6B7 739 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 AP1M2Q9Y6Q5 423 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 PIAS3Q9Y6X2 628 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 COL4A4P53420 1690 aaPredicted RBP6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 COL4A6Q14031 1691 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 ALPK3Q96L96 1907 aa6.78□□□□□ -1.32
CUBNP3-201ENST00000457461 TM9SF1O15321 606 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 CIDEAO60543 219 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 CDC123O75794 336 aaPredicted RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 CCNKO75909 580 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 CRTAMO95727 393 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 BCL10O95999 233 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 CRYABP02511 175 aaKnown RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PFKMP08237 780 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 FGFR1P11362 822 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 GNSP15586 552 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 JUNBP17275 347 aaPredicted RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PSMC3P17980 439 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 NR4A1P22736 598 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 MAP4P27816 1152 aaKnown RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 ERP29P30040 261 aaKnown RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 NOS2P35228 1153 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 EIF2S3P41091 472 aaKnown RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SLCO1A2P46721 670 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 ALDH1A3P47895 512 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 RPL34P49207 117 aaKnown RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 GPLD1P80108 840 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 TEKQ02763 1124 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PCDH1Q08174 1060 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 DSC1Q08554 894 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 FAAP100Q0VG06 881 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 NFATC3Q12968 1075 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SEMA3BQ13214 749 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 ADAM15Q13444 863 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 TUSC3Q13454 348 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 MAMLD1Q13495 774 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 CAMK1Q14012 370 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 RPS6KA1Q15418 735 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 TRIP13Q15645 432 aaPredicted RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SPATS1Q496A3 300 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PTPN20Q4JDL3 420 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 DGKKQ5KSL6 1271 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 LIN9Q5TKA1 542 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PM20D1Q6GTS8 502 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SULT1C3Q6IMI6 304 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 DENND1BQ6P3S1 775 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 ZYG11AQ6WRX3 759 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 CHERPQ8IWX8 916 aaKnown RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 GALNT12Q8IXK2 581 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 ULK2Q8IYT8 1036 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 CPA6Q8N4T0 437 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 C3orf58Q8NDZ4 430 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 APBB2Q92870 758 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SLC25A36Q96CQ1 311 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 MAGEB10Q96LZ2 347 aaPredicted RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SERPINB11Q96P15 392 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SORT1Q99523 831 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SEC22CQ9BRL7 303 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 C11orf70Q9BRQ4 267 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 OSBPL11Q9BXB4 747 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 GPR61Q9BZJ8 451 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PIF1Q9H611 641 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PNPLA8Q9NP80 782 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PRDM9Q9NQV7 894 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PLSCR2Q9NRY7 297 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 GLRX2Q9NS18 164 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 OR6C2Q9NZP2 312 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 SH3BGRL2Q9UJC5 107 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 AMFRQ9UKV5 643 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 TBX21Q9UL17 535 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PSME2Q9UL46 239 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 RAB23Q9ULC3 237 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 MRPS7Q9Y2R9 242 aaKnown RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 ALG6Q9Y672 507 aa6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 MKI67P46013 3256 aaKnown RBP6.77□□□□□ -1.33
CUBNP3-201ENST00000457461 PTPRSQ13332 1948 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms