RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 SEMA3AQ14563 771 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 HP1BP3Q5SSJ5 553 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 ZNF449Q6P9G9 518 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 CRTC3Q6UUV7 619 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 DBX2Q6ZNG2 339 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 MICALCLQ6ZW33 695 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 LRRC6Q86X45 466 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 GKN2Q86XP6 184 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 CILP2Q8IUL8 1156 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 RELL1Q8IUW5 271 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 GPBAR1Q8TDU6 330 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 LMX1AQ8TE12 382 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 BOCQ9BWV1 1114 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 TMEM168Q9H0V1 697 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 VPS37BQ9H9H4 285 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 PLAC1Q9HBJ0 212 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 INTS10Q9NVR2 710 aaKnown RBP14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 NLGN3Q9NZ94 848 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 ZNHIT2Q9UHR6 403 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 GPSM3Q9Y4H4 160 aa14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 DNMT3AQ9Y6K1 912 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-211ENST00000452495 OR2AG2A6NM03 316 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 LMO7DNF2Z398 122 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 SCAMP1O15126 338 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 KCNJ13O60928 360 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 ACP5P13686 325 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 VCLP18206 1134 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 MAGEA4P43358 317 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 CLCNKAP51800 687 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 BNIP3Q12983 259 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 INSCQ1MX18 579 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 UAP1L1Q3KQV9 507 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 ZNF547Q8IVP9 402 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 CNTN4Q8IWV2 1026 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 PALM2Q8IXS6 379 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 OR4C6Q8NH72 309 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.37□□□□□ -0.113e-6■■■■■ 32.5
TRAPPC12-211ENST00000452495 LINC00615Q96LM1 132 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 DUSP23Q9BVJ7 150 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 CLPBQ9H078 707 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 UCKL1Q9NWZ5 548 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 GNPTGQ9UJJ9 305 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 DOLKQ9UPQ8 538 aa14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 PCYT1BQ9Y5K3 369 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC12-211ENST00000452495 GOLGA8KD6RF30 607 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 GOLGA8TH3BQL2 631 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 PRMT5O14744 637 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 SGTAO43765 313 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 NDUFS3O75489 264 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 FTH1P02794 183 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 ANXA6P08133 673 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 CD59P13987 128 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 SDHBP21912 280 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 RPS3P23396 243 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 STX2P32856 288 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 SLC1A2P43004 574 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 CTSCP53634 463 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 ADARP55265 1226 aaKnown RBP14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 CTBSQ01459 385 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 DMPKQ09013 629 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 MGAT5Q09328 741 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 HSP90AA5PQ58FG0 334 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 KIAA0408Q6ZU52 694 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 DET1Q7L5Y6 550 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 CHST15Q7LFX5 561 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 C11orf96Q7Z7L8 435 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 GALNT7Q86SF2 657 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 GATAD2AQ86YP4 633 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 NAXDQ8IW45 347 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 SLC25A45Q8N413 288 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 UBXN4Q92575 508 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 LPGAT1Q92604 370 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 CCDC97Q96F63 343 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 C9orf72Q96LT7 481 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 TSSK1BQ9BXA7 367 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 ANKZF1Q9H8Y5 726 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 IL1RAPL1Q9NZN1 696 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 CDV3Q9UKY7 258 aaKnown RBP14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 NFU1Q9UMS0 254 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 PCDHB1Q9Y5F3 818 aa14.36□□□□□ -0.11
TRAPPC12-211ENST00000452495 PTPRZ1P23471 2315 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 H3BMM5 538 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 SLC30A4O14863 429 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 FFAR2O15552 330 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 CELA2BP08218 269 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 OR56A5P0C7T3 313 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 ERVK-10P10266 1014 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 ACTR1BP42025 376 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 ACTR1AP61163 376 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 C1orf61Q13536 156 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 SLMAPQ14BN4 828 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 SMAD1Q15797 465 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 PLA2G4EQ3MJ16 856 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 C6orf132Q5T0Z8 1188 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 ZCCHC8Q6NZY4 707 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 TMEM220Q6QAJ8 160 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 CYS1Q717R9 158 aa14.35□□□□□ -0.11
TRAPPC12-211ENST00000452495 TAF8Q7Z7C8 310 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms