RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 DENND6AQ8IWF6 608 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 GSPT2Q8IYD1 628 aaKnown RBP13.84□□□□□ -0.19
CTSS-202ENST00000448301 FSTL5Q8N475 847 aaPredicted RBP13.84□□□□□ -0.19
CTSS-202ENST00000448301 PNPLA1Q8N8W4 532 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 ZNF548Q8NEK5 533 aaPredicted RBP13.84□□□□□ -0.19
CTSS-202ENST00000448301 SAP25Q8TEE9 199 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 TIMM29Q9BSF4 260 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 PPANQ9NQ55 473 aaKnown RBP13.84□□□□□ -0.19
CTSS-202ENST00000448301 TM7SF3Q9NS93 570 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 RXFP3Q9NSD7 469 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 NINJ2Q9NZG7 142 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 ZNHIT2Q9UHR6 403 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 GPSM3Q9Y4H4 160 aa13.84□□□□□ -0.19
CTSS-202ENST00000448301 DNMT3AQ9Y6K1 912 aaPredicted RBP13.84□□□□□ -0.19
CTSS-202ENST00000448301 TCRBV9S1A1TA0A576 114 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 OR2AG2A6NM03 316 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 PRMT5O14744 637 aaPredicted RBP13.83□□□□□ -0.2
CTSS-202ENST00000448301 AQP9O43315 295 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 SGTAO43765 313 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 OR1I1O60431 355 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 SDC3O75056 442 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 S1PR4O95977 384 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 RPS3P23396 243 aaKnown RBP eCLIP13.83□□□□□ -0.2
CTSS-202ENST00000448301 DGKAP23743 735 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 PRLHRP49683 370 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 ADARP55265 1226 aaKnown RBP13.83□□□□□ -0.2
CTSS-202ENST00000448301 IL9RQ01113 521 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 BNIP3Q12983 259 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 CTBP1Q13363 440 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 ELOCQ15369 112 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 KYNUQ16719 465 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 PRRT3Q5FWE3 981 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 TEDDM1Q5T9Z0 273 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 CRTC3Q6UUV7 619 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 DET1Q7L5Y6 550 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 KANSL1Q7Z3B3 1105 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 C11orf96Q7Z7L8 435 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 GALNT7Q86SF2 657 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 LRRC6Q86X45 466 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 SDR16C5Q8N3Y7 309 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 C2CD4AQ8NCU7 369 aaPredicted RBP13.83□□□□□ -0.2
CTSS-202ENST00000448301 GPBAR1Q8TDU6 330 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 LPGAT1Q92604 370 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 SGF29Q96ES7 293 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 LINC00615Q96LM1 132 aaPredicted RBP13.83□□□□□ -0.2
CTSS-202ENST00000448301 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 CLPBQ9H078 707 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 TMEM168Q9H0V1 697 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 P2RY12Q9H244 342 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 CAAP1Q9H8G2 361 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 FBXO5Q9UKT4 447 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 PCDHGB2Q9Y5G2 931 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 PRSS21Q9Y6M0 314 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 CSNK1G3Q9Y6M4 447 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 KNL1Q8NG31 2342 aa13.83□□□□□ -0.2
CTSS-202ENST00000448301 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
CTSS-202ENST00000448301 UBA6A0AVT1 1052 aaPredicted RBP13.82□□□□□ -0.2
CTSS-202ENST00000448301 F8W8V4 182 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 SCAMP1O15126 338 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 KCNJ13O60928 360 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 C1QAP02745 245 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 TUBBP07437 444 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 FAM153BP0C7A2 387 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 OR56A5P0C7T3 313 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 STX2P32856 288 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 PHBP35232 272 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 LEPRP48357 1165 aaKnown RBP13.82□□□□□ -0.2
CTSS-202ENST00000448301 ILF3Q12906 894 aaKnown RBP eCLIP13.82□□□□□ -0.2
CTSS-202ENST00000448301 SLC14A1Q13336 389 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 FAM153CQ494X1 144 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 CHST15Q7LFX5 561 aaPredicted RBP13.82□□□□□ -0.2
CTSS-202ENST00000448301 SLC26A11Q86WA9 606 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 CLDN19Q8N6F1 224 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 LMX1AQ8TE12 382 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 CDKL2Q92772 493 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 FUT8Q9BYC5 575 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 GSDMCQ9BYG8 508 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 TXLNGYQ9BZA5 131 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 VPS37BQ9H9H4 285 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 FBXO6Q9NRD1 293 aaPredicted RBP13.82□□□□□ -0.2
CTSS-202ENST00000448301 NSMCE4AQ9NXX6 385 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 ZFATQ9P243 1243 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 PRKAB1Q9Y478 270 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 PCDHB1Q9Y5F3 818 aa13.82□□□□□ -0.2
CTSS-202ENST00000448301 KLHL33A6NCF5 533 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 NEMP2A6NFY4 417 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 FAM159BA6NKW6 160 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 GSTM1P09488 218 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 ACP5P13686 325 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 CLCNKAP51800 687 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 LIMK1P53667 647 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 PMS2P54278 862 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 MPP1Q00013 466 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 CTBSQ01459 385 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 GSTM4Q03013 218 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 DMPKQ09013 629 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 C1orf61Q13536 156 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 SUZ12Q15022 739 aaKnown RBP13.81□□□□□ -0.2
CTSS-202ENST00000448301 INSCQ1MX18 579 aa13.81□□□□□ -0.2
CTSS-202ENST00000448301 ZNF789Q5FWF6 425 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms