RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 NFE2L1Q14494 772 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 SEMA3AQ14563 771 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 GPR33Q49SQ1 333 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 RNASEH2BQ5TBB1 312 aaKnown RBP11.73□□□□□ -0.53
RFC4-208ENST00000447345 OGFOD3Q6PK18 319 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 NLRP9Q7RTR0 991 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 C11orf96Q7Z7L8 435 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 CAND1Q86VP6 1230 aaKnown RBP11.73□□□□□ -0.53
RFC4-208ENST00000447345 OTUD6BQ8N6M0 293 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 NAT8LQ8N9F0 302 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.73□□□□□ -0.53
RFC4-208ENST00000447345 MFSD3Q96ES6 412 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 RUNDC3BQ96NL0 473 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 C19orf43Q9BQ61 176 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 ZDHHC3Q9NYG2 299 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 SAMD15Q9P1V8 674 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 LRIT1Q9P2V4 623 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 RNF14Q9UBS8 474 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 NEUROG3Q9Y4Z2 214 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 FRYQ5TBA9 3013 aa11.73□□□□□ -0.53
RFC4-208ENST00000447345 TRBV5-4A0A0C4DH59 114 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 GOLGA8KD6RF30 607 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 GOLGA8TH3BQL2 631 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 BANF1O75531 89 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 POP7O75817 140 aaKnown RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 URI1O94763 535 aaPredicted RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 F3P13726 295 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 JUPP14923 745 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 GLB1P16278 677 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 CCL7P80098 99 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 E2F1Q01094 437 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 ACVR1Q04771 509 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 SPIDRQ14159 915 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 AMZ1Q400G9 498 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 FASTKD1Q53R41 847 aaKnown RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 FAM83HQ6ZRV2 1179 aaPredicted RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 TMPRSS7Q7RTY8 843 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 LDB1Q86U70 411 aaPredicted RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 AMZ2Q86W34 360 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 CCNJLQ8IV13 435 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 GALNT15Q8N3T1 639 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 CLDN19Q8N6F1 224 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 MCUQ8NE86 351 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 SPATA4Q8NEY3 305 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 OR4L1Q8NH43 312 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 ZNF669Q96BR6 464 aaPredicted RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 ZMYND15Q9H091 742 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 XAB2Q9HCS7 855 aaKnown RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 TREX1Q9NSU2 369 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 CATSPERZQ9NTU4 200 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 IL1RAPL1Q9NZN1 696 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 SCHIP1Q9P0W5 487 aaPredicted RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 MARCH4Q9P2E8 410 aaPredicted RBP11.72□□□□□ -0.53
RFC4-208ENST00000447345 RIMKLBQ9ULI2 386 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 SOX13Q9UN79 622 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 PSMD13Q9UNM6 376 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 CLCA2Q9UQC9 943 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 MAD1L1Q9Y6D9 718 aa11.72□□□□□ -0.53
RFC4-208ENST00000447345 KNTC1P50748 2209 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 IGLV3-16A0A075B6K0 115 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 A6NCN8 305 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 OR52A4PA6NMU1 304 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 AGRPO00253 132 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 PPM1DO15297 605 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 SGTAO43765 313 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 NUDT21O43809 227 aaKnown RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 MT-CO3P00414 261 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 CDK4P11802 303 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 MLNP12872 115 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 ATP1B2P14415 290 aaPredicted RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 IDSP22304 550 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 PSMA3P25788 255 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 ALDH4A1P30038 563 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 MAPK9P45984 424 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 PRLHRP49683 370 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 OR1D5P58170 312 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 SHC2P98077 582 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 HHEXQ03014 270 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 TARDBPQ13148 414 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■■■□ 22.1
RFC4-208ENST00000447345 DHX34Q14147 1143 aaKnown RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 MAP9Q49MG5 647 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 BCL7AQ4VC05 210 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 SYDE1Q6ZW31 735 aaPredicted RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 SPRED1Q7Z699 444 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 TMPRSS12Q86WS5 348 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 C17orf82Q86X59 251 aaPredicted RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 TRIM48Q8IWZ4 208 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 AGGF1Q8N302 714 aaeCLIP11.71□□□□□ -0.53
RFC4-208ENST00000447345 SFRP1Q8N474 314 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 OR6C4Q8NGE1 309 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 ZNF514Q96K75 400 aaPredicted RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 KIFC1Q9BW19 673 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 STN1Q9H668 368 aaKnown RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 MRM3Q9HC36 420 aaKnown RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 ANAPC5Q9UJX4 755 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 ATXN7L1Q9ULK2 861 aaPredicted RBP11.71□□□□□ -0.53
RFC4-208ENST00000447345 WDR37Q9Y2I8 494 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 PRSS21Q9Y6M0 314 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 IGF2RP11717 2491 aa11.71□□□□□ -0.53
RFC4-208ENST00000447345 PRAMEF33A0A0G2JMD5 474 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms