RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 LHX9Q9NQ69 397 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 TLR8Q9NR97 1041 aaKnown RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 LNPEPQ9UIQ6 1025 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 EDARQ9UNE0 448 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 CEP83Q9Y592 693 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 ITIH6Q6UXX5 1313 aa4.94□□□□□ -1.62
SDCBP-205ENST00000447267 PRKDCP78527 4128 aaKnown RBP4.94□□□□□ -1.62
SDCBP-205ENST00000447267 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 FER1L5A0AVI2 2057 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 IGHV1OR21-1A0A087WYE8 117 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 TCRBV16S1A1N1A0A5B0 115 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 FAM92AA1XBS5 289 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 KPNA3O00505 521 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 OGTO15294 1046 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 PPM1DO15297 605 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ARHGEF9O43307 516 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 RRP9O43818 475 aaKnown RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 TBL1XO60907 577 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 BEST1O76090 585 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 NDUFA10O95299 355 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ASLP04424 464 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 HOXD4P09016 255 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 TYRP1P17643 537 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 MST1P26927 711 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 GARSP41250 739 aaKnown RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ECT2LQ008S8 904 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ATP1A4Q13733 1029 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 LAMB3Q13751 1172 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 PCBP2Q15366 365 aaKnown RBP eCLIP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ZNF174Q15697 407 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ZACNQ401N2 412 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 FSCBQ5H9T9 825 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 C20orf194Q5TEA3 1177 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 SPECC1LQ69YQ0 1117 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 RFWD3Q6PCD5 774 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 C3P1Q6ZMU1 363 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 GPRIN1Q7Z2K8 1008 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 BRAPQ7Z569 592 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ARHGAP22Q7Z5H3 698 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 POLNQ7Z5Q5 900 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 NEK8Q86SG6 692 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 SYVN1Q86TM6 617 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 RASGRP3Q8IV61 690 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 P3H2Q8IVL5 708 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 CD302Q8IX05 232 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 APCDD1Q8J025 514 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ZBTB2Q8N680 514 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 CSGALNACT2Q8N6G5 542 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 MAPK1IP1LQ8NDC0 245 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 CATSPER1Q8NEC5 780 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 PATE1Q8WXA2 126 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 OR8D1Q8WZ84 308 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 KIFAP3Q92845 792 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 BICD1Q96G01 975 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ZNF560Q96MR9 790 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 SPAG5Q96R06 1193 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 TAAR6Q96RI8 345 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 TSPAN18Q96SJ8 248 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 WDR77Q9BQA1 342 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 MRPL45Q9BRJ2 306 aaKnown RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 NCOA5Q9HCD5 579 aaKnown RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 TRIM39Q9HCM9 518 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 MBNL1Q9NR56 388 aaKnown RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 YAE1D1Q9NRH1 226 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 RASSF1Q9NS23 344 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ARHGEF38Q9NXL2 777 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 STMN3Q9NZ72 180 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 ORC3Q9UBD5 711 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 CPSF3Q9UKF6 684 aaKnown RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 FARSAQ9Y285 508 aaKnown RBP4.93□□□□□ -1.62
SDCBP-205ENST00000447267 DERAQ9Y315 318 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 MEMO1Q9Y316 297 aa4.93□□□□□ -1.62
SDCBP-205ENST00000447267 SEC16AO15027 2179 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 A0A087X1B8 175 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 A0A0G2JNJ9 132 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 FAM237BA0A1B0GVD1 139 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 DRGXA6NNA5 263 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 GOLGA8AA7E2F4 631 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 GOLGA8BA8MQT2 603 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 C21orf140B9A014 251 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 GOLGA6L22H0YM25 854 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 OVOL3O00110 214 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 SOCS6O14544 535 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 DVL2O14641 736 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 ZBTB43O43298 467 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 HIP1RO75146 1068 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 CTSLP07711 333 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 SRPRAP08240 638 aaKnown RBP4.92□□□□□ -1.62
SDCBP-205ENST00000447267 BRAFP15056 766 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 CD19P15391 556 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 MSX2P35548 267 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-205ENST00000447267 CASP6P55212 293 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 RPS15P62841 145 aaKnown RBP4.92□□□□□ -1.62
SDCBP-205ENST00000447267 COG7P83436 770 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 TFAMQ00059 246 aaKnown RBP4.92□□□□□ -1.62
SDCBP-205ENST00000447267 SGCGQ13326 291 aa4.92□□□□□ -1.62
SDCBP-205ENST00000447267 ZNF169Q14929 603 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms