RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 GNPDA1P46926 289 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 KIF19Q2TAC6 998 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 PTRHD1Q6GMV3 140 aaKnown RBP17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 ZC3HC1Q86WB0 502 aaKnown RBP17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 ZNF547Q8IVP9 402 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 KRT222Q8N1A0 295 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 SLC44A1Q8WWI5 657 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 SCG3Q8WXD2 468 aaKnown RBP17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 SKA1Q96BD8 255 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 ZBTB9Q96C00 473 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 BIRC8Q96P09 236 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 NDNQ99608 321 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 IRF2BPLQ9H1B7 796 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 CARS2Q9HA77 564 aaKnown RBP17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 TM7SF3Q9NS93 570 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 ARGLU1Q9NWB6 273 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 TXNDC16Q9P2K2 825 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 KLF15Q9UIH9 416 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 VPS9D1Q9Y2B5 631 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 SNX11Q9Y5W9 270 aa17.74■□□□□ 0.43
TRAPPC4-203ENST00000447216 SMIM23A6NLE4 172 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 TNFRSF10CO14798 259 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 CHUKO15111 745 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 GRID2O43424 1007 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 NIPSNAP2O75323 286 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 PKMP14618 531 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 HOXD12P35452 270 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 DPP6P42658 865 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 CTSKP43235 329 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 MSH2P43246 934 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 CSE1LP55060 971 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 PPARDQ03181 441 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 TRIM61Q5EBN2 209 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 GALNT7Q86SF2 657 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 PARGQ86W56 976 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 GPATCH11Q8N954 259 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 ACVR1CQ8NER5 493 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 CEP76Q8TAP6 659 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 DCAKDQ8WVC6 231 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 FAM136AQ96C01 138 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 SCARF2Q96GP6 870 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 RBBP8Q99708 897 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 MCMBPQ9BTE3 642 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 AARSD1Q9BTE6 412 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 KCNH6Q9H252 994 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 RHOJQ9H4E5 214 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 CAPN10Q9HC96 672 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 DNAJC28Q9NX36 388 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 FAM8A1Q9UBU6 413 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 GNPTGQ9UJJ9 305 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 MTO1Q9Y2Z2 717 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 PLEKHM1Q9Y4G2 1056 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 GPSM3Q9Y4H4 160 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 PCDHGA5Q9Y5G8 931 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 LAMA1P25391 3075 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 ANKRD12Q6UB98 2062 aa17.73■□□□□ 0.43
TRAPPC4-203ENST00000447216 AP2A2O94973 939 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 RASGRP1O95267 797 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 ESR1P03372 595 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 INHBAP08476 426 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 NUDT17P0C025 328 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 OR56A5P0C7T3 313 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 NBL1P41271 181 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 PGGT1BP53609 377 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 GRIK2Q13002 908 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 BMPR2Q13873 1038 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 BCL7AQ4VC05 210 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 PYCR3Q53H96 274 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 GRTP1Q5TC63 336 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 TCEAL6Q6IPX3 200 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 NAPRTQ6XQN6 538 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 RABEPKQ7Z6M1 372 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 LRRTM4Q86VH4 590 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 GALNT13Q8IUC8 556 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 PHACTR4Q8IZ21 702 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 EPS8L3Q8TE67 593 aaKnown RBP17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 TCEAL3Q969E4 200 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 VPS39Q96JC1 886 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 ELMO2Q96JJ3 720 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 OR2M4Q96R27 311 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 CCDC77Q9BR77 488 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 CCDC68Q9H2F9 335 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 RMI1Q9H9A7 625 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 SLC23A2Q9UGH3 650 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 SLC6A14Q9UN76 642 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 PCDHB1Q9Y5F3 818 aa17.72■□□□□ 0.43
TRAPPC4-203ENST00000447216 OTOGLQ3ZCN5 2332 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 FAM95CA0A1B0GW59 222 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 TRIM16O95361 564 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 TNFP01375 233 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 RETP07949 1114 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 JUNDP17535 347 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 SAT1P21673 171 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 SPRP35270 261 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 SLCO1A2P46721 670 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 PRLHRP49683 370 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 HK3P52790 923 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 ADARP55265 1226 aaKnown RBP17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 IFFO1Q0D2I5 559 aa17.71■□□□□ 0.43
TRAPPC4-203ENST00000447216 SLC23A3Q6PIS1 610 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms