RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MPP1Q00013 466 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 NFATC4Q14934 902 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 EFTUD2Q15029 972 aaKnown RBP eCLIP17.01■□□□□ 0.319e-6■■□□□ 13.8
LIME1-202ENST00000444951 TEAD4Q15561 434 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 MAP9Q49MG5 647 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 LDLRAP1Q5SW96 308 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 RD3Q7Z3Z2 195 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 MARCH9Q86YJ5 346 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 SLC22A18ASQ8N1D0 253 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 MFSD2AQ8NA29 543 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 CALML6Q8TD86 181 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 DTX3LQ8TDB6 740 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 TTC1Q99614 292 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 COPS8Q99627 209 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 BOCQ9BWV1 1114 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 SMYD2Q9NRG4 433 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 ZDHHC3Q9NYG2 299 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 MOCS1Q9NZB8 636 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 ANKRD6Q9Y2G4 727 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 APC2O95996 2303 aa17.01■□□□□ 0.31
LIME1-202ENST00000444951 TRBV5-4A0A0C4DH59 114 aa17■□□□□ 0.31
LIME1-202ENST00000444951 TMEM202A6NGA9 273 aa17■□□□□ 0.31
LIME1-202ENST00000444951 CXorf49A8MYA2 514 aaPredicted RBP17■□□□□ 0.31
LIME1-202ENST00000444951 TLR4O00206 839 aa17■□□□□ 0.31
LIME1-202ENST00000444951 RIPK2O43353 540 aa17■□□□□ 0.31
LIME1-202ENST00000444951 OR1I1O60431 355 aa17■□□□□ 0.31
LIME1-202ENST00000444951 ERLIN1O75477 346 aa17■□□□□ 0.31
LIME1-202ENST00000444951 HOXB3P14651 431 aaPredicted RBP17■□□□□ 0.31
LIME1-202ENST00000444951 TEAD1P28347 426 aa17■□□□□ 0.31
LIME1-202ENST00000444951 ABCG1P45844 678 aa17■□□□□ 0.31
LIME1-202ENST00000444951 TTPAP49638 278 aa17■□□□□ 0.31
LIME1-202ENST00000444951 KIAA1024LP59773 190 aa17■□□□□ 0.31
LIME1-202ENST00000444951 YPEL5P62699 121 aa17■□□□□ 0.31
LIME1-202ENST00000444951 FRG1Q14331 258 aaKnown RBP17■□□□□ 0.31
LIME1-202ENST00000444951 KBTBD12Q3ZCT8 623 aa17■□□□□ 0.31
LIME1-202ENST00000444951 ZNF542PQ5EBM4 170 aa17■□□□□ 0.31
LIME1-202ENST00000444951 TEDDM1Q5T9Z0 273 aa17■□□□□ 0.31
LIME1-202ENST00000444951 LYPLAL1Q5VWZ2 237 aa17■□□□□ 0.31
LIME1-202ENST00000444951 IL27RAQ6UWB1 636 aa17■□□□□ 0.31
LIME1-202ENST00000444951 CILP2Q8IUL8 1156 aa17■□□□□ 0.31
LIME1-202ENST00000444951 PPM1NQ8N819 430 aa17■□□□□ 0.31
LIME1-202ENST00000444951 DDHD1Q8NEL9 900 aa17■□□□□ 0.31
LIME1-202ENST00000444951 GPR150Q8NGU9 434 aa17■□□□□ 0.31
LIME1-202ENST00000444951 GABPB2Q8TAK5 448 aaPredicted RBP17■□□□□ 0.31
LIME1-202ENST00000444951 CDKL2Q92772 493 aa17■□□□□ 0.31
LIME1-202ENST00000444951 SGSM3Q96HU1 749 aa17■□□□□ 0.31
LIME1-202ENST00000444951 COX14Q96I36 57 aa17■□□□□ 0.31
LIME1-202ENST00000444951 WDR92Q96MX6 357 aa17■□□□□ 0.31
LIME1-202ENST00000444951 MRPL40Q9NQ50 206 aaKnown RBP17■□□□□ 0.31
LIME1-202ENST00000444951 SMOXQ9NWM0 555 aa17■□□□□ 0.31
LIME1-202ENST00000444951 ATXN10Q9UBB4 475 aa17■□□□□ 0.31
LIME1-202ENST00000444951 FBXO5Q9UKT4 447 aa17■□□□□ 0.31
LIME1-202ENST00000444951 PRKAB1Q9Y478 270 aa17■□□□□ 0.31
LIME1-202ENST00000444951 GOLGA4Q13439 2230 aaKnown RBP17■□□□□ 0.31
LIME1-202ENST00000444951 ITPR1Q14643 2758 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 A0A087WUV0 522 aaPredicted RBP16.99■□□□□ 0.31
LIME1-202ENST00000444951 UQCRHLA0A096LP55 91 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 AGAP14A8MT82 685 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 CDK14O94921 469 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 UQCRHP07919 91 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 RALBP11234 206 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 OGNP20774 298 aaKnown RBP16.99■□□□□ 0.31
LIME1-202ENST00000444951 PPARGP37231 505 aaPredicted RBP16.99■□□□□ 0.31
LIME1-202ENST00000444951 IL9RQ01113 521 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 TMEM115Q12893 351 aaPredicted RBP16.99■□□□□ 0.31
LIME1-202ENST00000444951 GTF2H3Q13889 308 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 PTK2BQ14289 1009 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 SLC29A2Q14542 456 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 BRD3Q15059 726 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 TCEA2Q15560 299 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 UAP1Q16222 522 aaPredicted RBP16.99■□□□□ 0.31
LIME1-202ENST00000444951 ZNF789Q5FWF6 425 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 PRAMEF14Q5SWL7 426 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 KCTD16Q68DU8 428 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 CRTC3Q6UUV7 619 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 CERS6Q6ZMG9 384 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 ADGRG6Q86SQ4 1221 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 FAM174AQ8TBP5 190 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 CAVIN3Q969G5 261 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 TSACCQ96A04 125 aaPredicted RBP16.99■□□□□ 0.31
LIME1-202ENST00000444951 SKA1Q96BD8 255 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 ATXN7L3BQ96GX2 97 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 CAAP1Q9H8G2 361 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 TRIM39Q9HCM9 518 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 KLQ9UEF7 1012 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 RABGEF1Q9UJ41 708 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 CRYL1Q9Y2S2 319 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 PCDHGB2Q9Y5G2 931 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 BPTFQ12830 3046 aa16.99■□□□□ 0.31
LIME1-202ENST00000444951 LOC400499M0QZD8 3231 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 ACACAQ13085 2346 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 FAM159BA6NKW6 160 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 OR2AG2A6NM03 316 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 CFAP99D6REC4 459 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 TOR1BO14657 336 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 VILLO15195 856 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 PFDN6O15212 129 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 HAUS5O94927 633 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 S1PR4O95977 384 aa16.98■□□□□ 0.31
LIME1-202ENST00000444951 CEACAM5P06731 702 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms