RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 FOXJ1Q92949 421 aa13.96□□□□□ -0.18
SMARCA4-204ENST00000444061 PPP3R2Q96LZ3 170 aa13.96□□□□□ -0.18
SMARCA4-204ENST00000444061 RTP3Q9BQQ7 232 aa13.96□□□□□ -0.18
SMARCA4-204ENST00000444061 GPN3Q9UHW5 284 aaPredicted RBP13.96□□□□□ -0.18
SMARCA4-204ENST00000444061 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.18
SMARCA4-204ENST00000444061 IQCF5A8MTL0 148 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 CD72P21854 359 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 SIX5Q8N196 739 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 SETD7Q8WTS6 366 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 TRMOQ9BU70 441 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 NUDT4Q9NZJ9 180 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 MAPRE3Q9UPY8 281 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 TCRBV7S3A2A0A539 114 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 IPO13O94829 963 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 SUOXP51687 545 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 LMX1AQ8TE12 382 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 WDR90Q96KV7 1748 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 SIKE1Q9BRV8 207 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 RAB11FIP5Q9BXF6 653 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 COQ6Q9Y2Z9 468 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 SRCP12931 536 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 LAMP2P13473 410 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 COX7A2P14406 83 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 CXCL12P48061 93 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 CLCNKAP51800 687 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 ZNF252P-AS1Q0IIN9 211 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 KCNJ11Q14654 390 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 CYB5D1Q6P9G0 228 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 MIER2Q8N344 545 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 KCNV2Q8TDN2 545 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 NEUROG2Q9H2A3 272 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 SOBPA7XYQ1 873 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 ATP1B2P14415 290 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 HNRNPLP14866 589 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 ALDH4A1P30038 563 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 GJA4P35212 333 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 NDUFA9Q16795 377 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 GKN2Q86XP6 184 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 CATSPER1Q8NEC5 780 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 PIWIL2Q8TC59 973 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 FAM83CQ9BQN1 747 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 CCM2Q9BSQ5 444 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 MAGEE1Q9HCI5 957 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 ATAD3AQ9NVI7 634 aa13.95□□□□□ -0.18
SMARCA4-204ENST00000444061 FAM47E-STBD1D6RA91 191 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC28A1O00337 649 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 AZIN1O14977 448 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 KMOO15229 486 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 MID1O15344 667 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 PEX11AO75192 247 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SNUPNO95149 360 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 GALK1P51570 392 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 GLIS1Q8NBF1 620 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 LMLNQ96KR4 655 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 CCDC138Q96M89 665 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SCML1Q9UN30 329 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 KCTD3Q9Y597 815 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 HGFP14210 728 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SSR2P43308 183 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SOX9P48436 509 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 CYP4F2P78329 520 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 GPRC6AQ5T6X5 926 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SCIMPQ6UWF3 145 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 NPWQ8N729 165 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 FAM120BQ96EK7 910 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 A0A0J9YYE9 177 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 OR10H2O60403 315 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 NIPSNAP2O75323 286 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 TRBC1P01850 177 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC6A4P31645 630 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 HNF1BP35680 557 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 RANBP1P43487 201 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 ZNF234Q14588 700 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 PCBD2Q9H0N5 130 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 TMEM98Q9Y2Y6 226 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 BIRC5O15392 142 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 GRID2O43424 1007 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 PI15O43692 258 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 OAS1P00973 400 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 NKX3-2P78367 333 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 BST1Q10588 318 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC10A2Q12908 348 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 OLIG2Q13516 323 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 FASTKQ14296 549 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SLC44A4Q53GD3 710 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 PPM1JQ5JR12 505 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SRFBP1Q8NEF9 429 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 BCL7CQ8WUZ0 217 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 ATXN2LQ8WWM7 1075 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SCAMP4Q969E2 229 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 HIC2Q96JB3 615 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 AARSD1Q9BTE6 412 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 PHF7Q9BWX1 381 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 SGK2Q9HBY8 427 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 ARHGEF3Q9NR81 526 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 KCNK6Q9Y257 313 aa13.94□□□□□ -0.18
SMARCA4-204ENST00000444061 H3BQF6 201 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 FFAR2O15552 330 aa13.93□□□□□ -0.18
SMARCA4-204ENST00000444061 SEMA4FO95754 770 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms