RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SYTL2Q9HCH5 934 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 BPIFA1Q9NP55 256 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 PRDM8Q9NQV8 689 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 ABI2Q9NYB9 513 aaPredicted RBP8.97□□□□□ -0.97
COPB1-202ENST00000439561 ERVK-18Q9QC07 812 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 PGAP2Q9UHJ9 254 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 ADAMTS5Q9UNA0 930 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 GMPPBQ9Y5P6 360 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 NRCAMQ92823 1304 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 SHROOM3Q8TF72 1996 aa8.97□□□□□ -0.97
COPB1-202ENST00000439561 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 ACOX3O15254 700 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 SULT1C4O75897 302 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 PGLSO95336 258 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 TCF3P15923 654 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 CRHBPP24387 322 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 MTA1Q13330 715 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 TRIM60Q495X7 471 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 INTS6LQ5JSJ4 861 aaKnown RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 ANKRD46Q86W74 232 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 ANKRD13BQ86YJ7 626 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 GPSM1Q86YR5 675 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 ADHFE1Q8IWW8 467 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 DTWD1Q8N5C7 304 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 SH3RF2Q8TEC5 729 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 STON2Q8WXE9 905 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 STARD8Q92502 1023 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 IL12RB2Q99665 862 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 MYOCQ99972 504 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 TUBA1CQ9BQE3 449 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 DPY30Q9C005 99 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 CRTAC1Q9NQ79 661 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 FAM118AQ9NWS6 357 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 TPRKBQ9Y3C4 175 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 PCDHGA11Q9Y5H2 935 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 AHDC1Q5TGY3 1603 aaPredicted RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 A0A1B0GTL3 188 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 CCDC162PA2VCL2 907 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 POMCP01189 267 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 FYNP06241 537 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 MYL3P08590 195 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 FSHRP23945 695 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 GTF2E2P29084 291 aaKnown RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 PCSK1P29120 753 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 EFEMP1Q12805 493 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 NPTX1Q15818 432 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 AP5B1Q2VPB7 878 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 RBM48Q5RL73 367 aaKnown RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 SPRED1Q7Z699 444 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 HID1Q8IV36 788 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 PHACTR4Q8IZ21 702 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 TTC30BQ8N4P2 665 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 PSMG2Q969U7 264 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 YTHDF1Q9BYJ9 559 aaKnown RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 C8orf4Q9NR00 106 aa8.96□□□□□ -0.97
COPB1-202ENST00000439561 SDR39U1Q9NRG7 319 aaPredicted RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 TRMT13Q9NUP7 481 aaKnown RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 OAS3Q9Y6K5 1087 aaKnown RBP8.96□□□□□ -0.97
COPB1-202ENST00000439561 SCN1AP35498 2009 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 LOC100130705A0A1B0GUX0 176 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.96□□□□□ -0.98
COPB1-202ENST00000439561 PABPN1LA6NDY0 278 aaKnown RBP8.96□□□□□ -0.98
COPB1-202ENST00000439561 MOXD2PA6NHM9 499 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 A8MV72 311 aaPredicted RBP8.96□□□□□ -0.98
COPB1-202ENST00000439561 M0QZ92 97 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 ARVCFO00192 962 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 IDH3BO43837 385 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 DFNA5O60443 496 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 MITFO75030 526 aaPredicted RBP8.96□□□□□ -0.98
COPB1-202ENST00000439561 VPS4BO75351 444 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 VPS26AO75436 327 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 ECI2O75521 394 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 CCNKO75909 580 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 STAU1O95793 577 aaKnown RBP8.96□□□□□ -0.98
COPB1-202ENST00000439561 CAPN1P07384 714 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 G6PDP11413 515 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 EDNRBP24530 442 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 IGFBP5P24593 272 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 HOXA11P31270 313 aaPredicted RBP8.96□□□□□ -0.98
COPB1-202ENST00000439561 PIGAP37287 484 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 EEFSECP57772 596 aaKnown RBP8.96□□□□□ -0.98
COPB1-202ENST00000439561 AQP6Q13520 282 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 SELPLGQ14242 412 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 DMC1Q14565 340 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 SF3B4Q15427 424 aaKnown RBP eCLIP8.96□□□□□ -0.981e-6■■■■■ 32.9
COPB1-202ENST00000439561 CRY1Q16526 586 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 UGT3A2Q3SY77 523 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 TMEM207Q6UWW9 146 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 LGI2Q8N0V4 545 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 AURKBQ96GD4 344 aaPredicted RBP8.96□□□□□ -0.98
COPB1-202ENST00000439561 DMRTB1Q96MA1 342 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 CSF3RQ99062 836 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 CEP44Q9C0F1 390 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 USE1Q9NZ43 259 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 KLQ9UEF7 1012 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 SARDHQ9UL12 918 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 CDH9Q9ULB4 789 aa8.96□□□□□ -0.98
COPB1-202ENST00000439561 PDZK1P1A8MUH7 402 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 H0YAE9 185 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SEC22BO75396 215 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms