RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 UBALD2Q8IYN6 164 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 SPATA22Q8NHS9 363 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 CRB3Q9BUF7 120 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 GFRA4Q9GZZ7 299 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 CHODLQ9H9P2 273 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 ZCCHC17Q9NP64 241 aaKnown RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 RAB23Q9ULC3 237 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 CDC14AQ9UNH5 594 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 MED13Q9UHV7 2174 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 ATXN2Q99700 1313 aaKnown RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 NSD1Q96L73 2696 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 A0A1W2PS18 150 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 DNM1LO00429 736 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 LRP3O75074 770 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 NDUFB4O95168 129 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 TBX6O95947 436 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 FGF5P12034 268 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 CSF2RAP15509 400 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 HNRNPH1P31943 449 aaKnown RBP2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 STX2P32856 288 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 RYKP34925 604 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 IL15P40933 162 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 TIGD6Q17RP2 521 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 SOWAHAQ2M3V2 549 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 ESCO2Q56NI9 601 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 HSP90AB2PQ58FF8 381 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 PPP6R3Q5H9R7 873 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 PAPPA-AS1Q5QFB9 102 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 CBWD5Q5RIA9 395 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 TOGARAM2Q6ZUX3 1019 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 CACNA2D3Q8IZS8 1091 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 ZNF485Q8NCK3 441 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 DBF4BQ8NFT6 615 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 SVIPQ8NHG7 77 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 ERGIC1Q969X5 290 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 PCGF6Q9BYE7 350 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 ZNF696Q9H7X3 374 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 ABCF3Q9NUQ8 709 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 MTUS1Q9ULD2 1270 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 MYO10Q9HD67 2058 aa2.84□□□□□ -1.95
HMGB1P18-201ENST00000438801 A0A1B0GU03 582 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 ABHD14A-ACY1A0A1B0GW23 586 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 IPO5O00410 1097 aaKnown RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 SOCS6O14544 535 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 DHX16O60231 1041 aaKnown RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 TIMP1P01033 207 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 CHRM4P08173 479 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 ZNF8P17098 575 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 CCND3P30281 292 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 TBX4P57082 545 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 LINC01547P58512 204 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 RELQ04864 619 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 SLC20A2Q08357 652 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 CUL4BQ13620 913 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 BLMHQ13867 455 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 RUNX2Q13950 521 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 EDRF1Q3B7T1 1238 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 IRAK1BP1Q5VVH5 260 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 CCSAPQ6IQ19 270 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 DENND1BQ6P3S1 775 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 WDR73Q6P4I2 378 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 CCNI2Q6ZMN8 369 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 DSG4Q86SJ6 1040 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 RPAINQ86UA6 219 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 PARP16Q8N5Y8 322 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 DMBX1Q8NFW5 382 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 GRAPLQ8TC17 118 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 SDCCAG3Q96C92 435 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 ZNF501Q96CX3 271 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 LTV1Q96GA3 475 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 TWSG1Q9GZX9 223 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 TMX4Q9H1E5 349 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 PRORYQ9H606 182 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 DDX43Q9NXZ2 648 aaKnown RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 C1RLQ9NZP8 487 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 POU2F3Q9UKI9 436 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 PSAT1Q9Y617 370 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 AKAP9Q99996 3911 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 GRIN2DO15399 1336 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 MAP3K19Q56UN5 1328 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 RPAP1Q9BWH6 1393 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 OTOFQ9HC10 1997 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 TENM3Q9P273 2699 aa2.83□□□□□ -1.96
HMGB1P18-201ENST00000438801 SONP18583 2426 aaKnown RBP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 SIP14410 1827 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 RYR2Q92736 4967 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 A0A087WV48 116 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 A0A0U1RQF3 1178 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 A0A1B0GVY2 172 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 ASPDHA6ND91 283 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 SERINC4A6NH21 518 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 CBY3A6NI87 242 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 HSPB2A8KAH6 182 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 KBTBD13C9JR72 458 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 KLRF2D3W0D1 207 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 STX16-NPEPL1H3BU86 382 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 STX16O14662 325 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 PLRG1O43660 514 aaKnown RBP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 MTA2O94776 668 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms