RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 P2RX3P56373 397 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ECT2LQ008S8 904 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ZBED5Q49AG3 693 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 VPS26BQ4G0F5 336 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ARTNQ5T4W7 220 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 AFMIDQ63HM1 303 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 IFNEQ86WN2 208 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 BPIFB6Q8NFQ5 453 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 TUBGCP3Q96CW5 907 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 RMDN1Q96DB5 314 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ASB9Q96DX5 294 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 MYEOVQ96EZ4 313 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 C1orf74Q96LT6 269 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 SMIM14Q96QK8 99 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 FBXO44Q9H4M3 255 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 NOL11Q9H8H0 719 aaKnown RBP12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 AKTIPQ9H8T0 292 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ITM2CQ9NQX7 267 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ZMAT5Q9UDW3 170 aaKnown RBP12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 VPS28Q9UK41 221 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ZNF839A8K0R7 811 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 MUSKO15146 869 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 LDB2O43679 373 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 SCO1O75880 301 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 LINC00032P0C843 101 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 FOXA1P55317 472 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 UNC50Q53HI1 259 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ZNF678Q5SXM1 525 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 FAM171A1Q5VUB5 890 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 SDE2Q6IQ49 451 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 CYP20A1Q6UW02 462 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 CCDC117Q8IWD4 279 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 CATSPER1Q8NEC5 780 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ARRDC2Q8TBH0 407 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ACDQ96AP0 544 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 DACT3Q96B18 629 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 CYP2S1Q96SQ9 504 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 SLC25A23Q9BV35 468 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 ZNF717Q9BY31 904 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 SEMA4BQ9NPR2 832 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 CRNNQ9UBG3 495 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 EGFL7Q9UHF1 273 aa12.12□□□□□ -0.47
SEMA3F-206ENST00000434342 A0A0D9SEW6 157 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 PRSS51A0A1B0GVH4 220 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 SNTNA6NMZ2 147 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 AKAP10O43572 662 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 NDUFS2O75306 463 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 TIPRLO75663 272 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 CDH1P12830 882 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 CKMT2P17540 419 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 TYMPP19971 482 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 FMO4P31512 558 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 ETV3P41162 512 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 CASP2P42575 452 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 HNRNPFP52597 415 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 KCNC4Q03721 635 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 CRHR2Q13324 411 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 IRF5Q13568 498 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 SCIMPQ6UWF3 145 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 GATAD2AQ86YP4 633 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 HERC6Q8IVU3 1022 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 CHERPQ8IWX8 916 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 GIPC2Q8TF65 315 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 ESAMQ96AP7 390 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 SLC39A13Q96H72 371 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 MFSD1Q9H3U5 465 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 SCML2Q9UQR0 700 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 A8MV72 311 aaPredicted RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 RSL1D1O76021 490 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 SRP72O76094 671 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 CHRM3P20309 590 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 CAPRIN1Q14444 709 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 RFTN1Q14699 578 aaPredicted RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 RAB39AQ14964 217 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 TAF12Q16514 161 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 NFE2Q16621 373 aaPredicted RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 MTX3Q5HYI7 312 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 VARS2Q5ST30 1063 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 MRNIPQ6NTE8 343 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 MSANTD2Q6P1R3 559 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 ZNF549Q6P9A3 640 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 RAB44Q7Z6P3 723 aaPredicted RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 SLC22A16Q86VW1 577 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 DCBLD1Q8N8Z6 715 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.471e-6■■■■□ 19.9
SEMA3F-206ENST00000434342 BTN2A3PQ96KV6 586 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 C8orf48Q96LL4 319 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 POLR1EQ9GZS1 481 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 HOXD1Q9GZZ0 328 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 PCDHB5Q9Y5E4 795 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 DNAJC15Q9Y5T4 150 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 A0A0J9YYE9 177 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 PIP5K1BO14986 540 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 PBX3P40426 434 aa12.11□□□□□ -0.47
SEMA3F-206ENST00000434342 KCNQ1P51787 676 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms