RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 WNT5AP41221 380 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 VAMP2P63027 116 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 GPR68Q15743 365 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 TCTEX1D4Q5JR98 221 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 BSPRYQ5W0U4 402 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 PM20D2Q8IYS1 436 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 OR1J2Q8NGS2 313 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 MRGPRDQ8TDS7 321 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 ZNRF4Q8WWF5 429 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 KIF1BPQ96EK5 621 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 SIL1Q9H173 461 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 PLCXD1Q9NUJ7 323 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 COPG2Q9UBF2 871 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 UBA2Q9UBT2 640 aaPredicted RBP3.27□□□□□ -1.89
PTPN4-205ENST00000433888 STK39Q9UEW8 545 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 TBX20Q9UMR3 447 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 CLIC4Q9Y696 253 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 ARHGEF40Q8TER5 1519 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 CCDC189A1A4V9 331 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 PRR32B1ATL7 298 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 JRKO75564 520 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 ANXA7P20073 488 aaKnown RBP3.26□□□□□ -1.89
PTPN4-205ENST00000433888 SHC1P29353 583 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 CDC16Q13042 620 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 DCTN2Q13561 401 aaKnown RBP3.26□□□□□ -1.89
PTPN4-205ENST00000433888 DHX8Q14562 1220 aaKnown RBP3.26□□□□□ -1.89
PTPN4-205ENST00000433888 XKR6Q5GH73 641 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 PWWP2BQ6NUJ5 590 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 GCSAMQ8N6F7 178 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 OR2T12Q8NG77 320 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 NR1H4Q96RI1 486 aaPredicted RBP3.26□□□□□ -1.89
PTPN4-205ENST00000433888 SMC6Q96SB8 1091 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 PKP2Q99959 881 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 PELI2Q9HAT8 420 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 PTTG2Q9NZH5 202 aa3.26□□□□□ -1.89
PTPN4-205ENST00000433888 CNOT8Q9UFF9 292 aaKnown RBP3.26□□□□□ -1.89
PTPN4-205ENST00000433888 ZNF318Q5VUA4 2279 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 PLK4O00444 970 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 MOCS3O95396 460 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 F9P00740 461 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 ICAM1P05362 532 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 KRT19P08727 400 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 SELLP14151 372 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 TLX1P31314 330 aaPredicted RBP3.25□□□□□ -1.89
PTPN4-205ENST00000433888 ARL1P40616 181 aaPredicted RBP3.25□□□□□ -1.89
PTPN4-205ENST00000433888 HALP42357 657 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 MMP15P51511 669 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 SLC8A3P57103 927 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 SNX16P57768 344 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 NEXNQ0ZGT2 675 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 PDE1CQ14123 709 aaPredicted RBP3.25□□□□□ -1.89
PTPN4-205ENST00000433888 ASPRV1Q53RT3 343 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 RASGEF1CQ8N431 466 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 ZNF843Q8N446 348 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 EMC1Q8N766 993 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 HM13Q8TCT9 377 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 ZNF414Q96IQ9 312 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 RHNO1Q9BSD3 238 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 TRIM51Q9BSJ1 452 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 VEZTQ9HBM0 779 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 PRR34Q9NV39 138 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 GGA3Q9NZ52 723 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 MKLN1Q9UL63 735 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 YIPF1Q9Y548 306 aa3.25□□□□□ -1.89
PTPN4-205ENST00000433888 KDM3AQ9Y4C1 1321 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 EIF3JO75822 258 aaKnown RBP3.24□□□□□ -1.89
PTPN4-205ENST00000433888 AP2A2O94973 939 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 NKX2-2O95096 273 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 CNTFP26441 200 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 CTSCP53634 463 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 KCNJ10P78508 379 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 ENPP2Q13822 863 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 UGP2Q16851 508 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 GRAMD1BQ3KR37 738 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 ZNF805Q5CZA5 627 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 FAM69AQ5T7M9 428 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 SLC9C2Q5TAH2 1124 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 NDUFAF5Q5TEU4 345 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 CYP26C1Q6V0L0 522 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 PTOV1Q86YD1 416 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 PLD3Q8IV08 490 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 ANKRD18AQ8IVF6 992 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 SLC5A8Q8N695 610 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 PAF1Q8N7H5 531 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 HVCN1Q96D96 273 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 GIMAP5Q96F15 307 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 SLC47A1Q96FL8 570 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 EGLN2Q96KS0 407 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 FOXN4Q96NZ1 517 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 ZNF300Q96RE9 604 aaPredicted RBP3.24□□□□□ -1.89
PTPN4-205ENST00000433888 SEMA3CQ99985 751 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 STRA6Q9BX79 667 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 FGFBP2Q9BYJ0 223 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 LAT2Q9GZY6 243 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 RANBP17Q9H2T7 1088 aaKnown RBP3.24□□□□□ -1.89
PTPN4-205ENST00000433888 PIGMQ9H3S5 423 aa3.24□□□□□ -1.89
PTPN4-205ENST00000433888 CSAG2Q9Y5P2 127 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms