RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PANX3Q96QZ0 392 aa19.32■□□□□ 0.68
VRK2-205ENST00000432057 ZDHHC3Q9NYG2 299 aa19.32■□□□□ 0.68
VRK2-205ENST00000432057 CDH22Q9UJ99 828 aa19.32■□□□□ 0.68
VRK2-205ENST00000432057 TMCO1Q9UM00 188 aa19.32■□□□□ 0.68
VRK2-205ENST00000432057 AIM2O14862 343 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 PIP5K1BO14986 540 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 TULP3O75386 442 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 KRT36O76013 467 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 FGF4P08620 206 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 NUDT2P50583 147 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 MESP2Q0VG99 397 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 ARHGEF7Q14155 803 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 RIPOR1Q6ZS17 1223 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 ADAMTSL2Q86TH1 951 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 ENDOVQ8N8Q3 282 aaKnown RBP19.31■□□□□ 0.68
VRK2-205ENST00000432057 RCN3Q96D15 328 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 APOL5Q9BWW9 433 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 EBF3Q9H4W6 596 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 SFXN1Q9H9B4 322 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 IL36AQ9UHA7 158 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 C5orf42Q9H799 3197 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 UBDO15205 165 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 PDE5AO76074 875 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 VIPR1P32241 457 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 RGS4P49798 205 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 B4GALNT1Q00973 533 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 RBBP7Q16576 425 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 POM121L1PQ3SYA9 428 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 GK5Q6ZS86 529 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 LARP4Q71RC2 724 aaKnown RBP eCLIP19.31■□□□□ 0.68
VRK2-205ENST00000432057 MYO1HQ8N1T3 1032 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 HMGCLL1Q8TB92 370 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 BPIFB1Q8TDL5 484 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 WFIKKN2Q8TEU8 576 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 ASB16Q96NS5 453 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 COPS8Q99627 209 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 FBRSL1Q9HCM7 1045 aaKnown RBP19.31■□□□□ 0.68
VRK2-205ENST00000432057 PKD2L2Q9NZM6 624 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 SLC8A2Q9UPR5 921 aa19.31■□□□□ 0.68
VRK2-205ENST00000432057 TSPAN11A1L157 253 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 UPK3BL1B0FP48 263 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 UPK3BL2E5RIL1 263 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 LMNAP02545 664 aaKnown RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 SRPRAP08240 638 aaKnown RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 CYP2A6P11509 494 aaPredicted RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 PRDX3P30048 256 aaKnown RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 NSG1P42857 185 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 TBL3Q12788 808 aaKnown RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 SQLEQ14534 574 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 C18orf21Q32NC0 220 aaPredicted RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 TRMT5Q32P41 509 aaKnown RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 RARS2Q5T160 578 aaKnown RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 GPRC6AQ5T6X5 926 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 HSD11B1LQ7Z5J1 315 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 SYVN1Q86TM6 617 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 DDIASQ8IXT1 998 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 NXPE3Q969Y0 559 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 TUBB1Q9H4B7 451 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 DCLRE1BQ9H816 532 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 PCDH12Q9NPG4 1184 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 NOP53Q9NZM5 478 aaKnown RBP19.3■□□□□ 0.68
VRK2-205ENST00000432057 GIMAP2Q9UG22 337 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 ADAMTS6Q9UKP5 1117 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 TMPRSS11EQ9UL52 423 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 BTRCQ9Y297 605 aa19.3■□□□□ 0.68
VRK2-205ENST00000432057 E2F3O00716 465 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 SORBS2O94875 1100 aaKnown RBP19.29■□□□□ 0.68
VRK2-205ENST00000432057 PSMG1O95456 288 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 ASLP04424 464 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 TIMP2P16035 220 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 DGKAP23743 735 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 FSHRP23945 695 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 SLC6A11P48066 632 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 C6orf163Q5TEZ5 329 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 GET4Q7L5D6 327 aaPredicted RBP19.29■□□□□ 0.68
VRK2-205ENST00000432057 ETFBKMTQ8IXQ9 262 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 EFCAB3Q8N7B9 438 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 SNX31Q8N9S9 440 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 HGH1Q9BTY7 390 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 DOCK8Q8NF50 2099 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 REV3LO60673 3130 aa19.29■□□□□ 0.68
VRK2-205ENST00000432057 GPC4O75487 556 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 CRCPO75575 148 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 S100BP04271 92 aaPredicted RBP19.28■□□□□ 0.68
VRK2-205ENST00000432057 ZNF30P17039 623 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 NAA20P61599 178 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 RCN1Q15293 331 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 GAB4Q2WGN9 574 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 C1orf146Q5VVC0 180 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 ZDHHC20Q5W0Z9 365 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 KCNV2Q8TDN2 545 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 FGF13Q92913 245 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 SMARCD2Q92925 531 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 STMN2Q93045 179 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 ULK4Q96C45 1275 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 SPATA16Q9BXB7 569 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 FAM126AQ9BYI3 521 aaPredicted RBP19.28■□□□□ 0.68
VRK2-205ENST00000432057 AKTIPQ9H8T0 292 aa19.28■□□□□ 0.68
VRK2-205ENST00000432057 SPATS2LQ9NUQ6 558 aaKnown RBP19.28■□□□□ 0.68
VRK2-205ENST00000432057 ZNF225Q9UK10 706 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms