RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 PIRTP0C851 137 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 BRAFP15056 766 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 TYRP1P17643 537 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 DMPKQ09013 629 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 TMEM115Q12893 351 aaPredicted RBP13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 PRKD1Q15139 912 aaPredicted RBP13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 TCEAL1Q15170 157 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 PCSK7Q16549 785 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 DEFB109BQ30KR1 87 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 LACTB2Q53H82 288 aaPredicted RBP13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 ZNF648Q5T619 568 aaPredicted RBP13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 CACHD1Q5VU97 1274 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 C11orf96Q7Z7L8 435 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 PPP1R3BQ86XI6 285 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 RFX6Q8HWS3 928 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 RHOT1Q8IXI2 618 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 UBXN4Q92575 508 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 STAMBPL1Q96FJ0 436 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 OR6C1Q96RD1 312 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 VAT1Q99536 393 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 INTUQ9ULD6 942 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 POLHQ9Y253 713 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 DNAJC16Q9Y2G8 782 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 PCDHGA6Q9Y5G7 932 aa13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 RP1L1Q8IWN7 2480 aaPredicted RBP13.31□□□□□ -0.28
GCSHP3-201ENST00000431120 C21orf140B9A014 251 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 MKRN2OSH3BPM6 223 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 CBFA2T2O43439 604 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 KRT1P04264 644 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 NELFEP18615 380 aaKnown RBP13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 PTPN3P26045 913 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 RPL10P27635 214 aaKnown RBP13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 DLSTP36957 453 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 FOXK1P85037 733 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 KLRB1Q12918 225 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 GPR18Q14330 331 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 SKIDA1Q1XH10 827 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 PLA2G4EQ3MJ16 856 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 ATP13A5Q4VNC0 1218 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 COLEC12Q5KU26 742 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 LDLRAP1Q5SW96 308 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 TCTN3Q6NUS6 607 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 C16orf46Q6P387 395 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 AMZ2Q86W34 360 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 KMT5CQ86Y97 462 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 TRAPPC5Q8IUR0 188 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 RASGRP3Q8IV61 690 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 SPATA22Q8NHS9 363 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 GDAP1Q8TB36 358 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 TFB1MQ8WVM0 346 aaKnown RBP13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 ZFPM2Q8WW38 1151 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 ZNF514Q96K75 400 aaPredicted RBP13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 CCDC42Q96M95 316 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 CD180Q99467 661 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 PDE7BQ9NP56 450 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 IL26Q9NPH9 171 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 CROTQ9UKG9 612 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 TMPRSS11EQ9UL52 423 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 PADI1Q9ULC6 663 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 KCNMB2Q9Y691 235 aa13.3□□□□□ -0.28
GCSHP3-201ENST00000431120 OR52A4PA6NMU1 304 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 MTX2O75431 263 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 PMPCBO75439 489 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 SPAG6O75602 509 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 KIAA0754O94854 1291 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 SLC4A1P02730 911 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 ZNF28P17035 718 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 FECHP22830 423 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 SPAM1P38567 509 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 LEPRP48357 1165 aaKnown RBP13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 SEPHS1P49903 392 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 ACY1Q03154 408 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 ITGA9Q13797 1035 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 SEPT7Q16181 437 aaKnown RBP13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 TAZQ16635 292 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 KHDC1Q4VXA5 237 aaKnown RBP13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 NPNTQ6UXI9 565 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 CARFQ8N187 725 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 BEND7Q8N7W2 519 aaPredicted RBP13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 GALNT6Q8NCL4 622 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 RSC1A1Q92681 617 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 SLC41A2Q96JW4 573 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 ZNF71Q9NQZ8 489 aaPredicted RBP13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 SMOXQ9NWM0 555 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 IL17CQ9P0M4 197 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 SPO11Q9Y5K1 396 aa13.29□□□□□ -0.28
GCSHP3-201ENST00000431120 AURKAO14965 403 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 PSTPIP1O43586 416 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 PYGMP11217 842 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 HLA-DPA1P20036 260 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 PTMSP20962 102 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 F8A1P23610 371 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 CDKN2BP42772 138 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 DRG2P55039 364 aaKnown RBP13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 WNT3AP56704 352 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 SH3BP2P78314 561 aa13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.28
GCSHP3-201ENST00000431120 UBAP2LQ14157 1087 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms