RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 WDR37Q9Y2I8 494 aa13.41□□□□□ -0.26
SNX3-204ENST00000426155 JRKLQ9Y4A0 524 aa13.41□□□□□ -0.26
SNX3-204ENST00000426155 URB1O60287 2271 aaKnown RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 IGHV1OR21-1A0A087WYE8 117 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 OR52A4PA6NMU1 304 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 E7EVH7 732 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 PSMD3O43242 534 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 SGTAO43765 313 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 POP7O75817 140 aaKnown RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 SUN1O94901 812 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 APRTP07741 180 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 HOXB3P14651 431 aaPredicted RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 MSH3P20585 1137 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 CD1CP29017 333 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 ACTN2P35609 894 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 MAPK9P45984 424 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 BASP1P80723 227 aaKnown RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 PDE1BQ01064 536 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 CDH17Q12864 832 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 NFE2L1Q14494 772 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 PHF19Q5T6S3 580 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 DRICH1Q6PGQ1 229 aaPredicted RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 TMEM220Q6QAJ8 160 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 XKR5Q6UX68 686 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 PPP1R21Q6ZMI0 780 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 ZNF574Q6ZN55 896 aaPredicted RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 GSTA5Q7RTV2 222 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 SLITRK4Q8IW52 837 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 NXPE1Q8N323 547 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 RCBTB1Q8NDN9 531 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 TRIM44Q96DX7 344 aaPredicted RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 SGF29Q96ES7 293 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 SLC38A3Q99624 504 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 ZCCHC2Q9C0B9 1178 aaKnown RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 ASCL3Q9NQ33 180 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 NLE1Q9NVX2 485 aaPredicted RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 KCNK4Q9NYG8 393 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 SLC2A6Q9UGQ3 507 aa13.4□□□□□ -0.26
SNX3-204ENST00000426155 TTC7AQ9ULT0 858 aaPredicted RBP13.4□□□□□ -0.26
SNX3-204ENST00000426155 NBEAQ8NFP9 2946 aa13.4□□□□□ -0.27
SNX3-204ENST00000426155 CCDC187A0A096LP49 1063 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 ERI2A8K979 691 aaKnown RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 AGAP14A8MT82 685 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 ZNF185O15231 689 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 CPNE6O95741 557 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 ITIH1P19827 911 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 ITGALP20701 1170 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 CCKBRP32239 447 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 HADHAP40939 763 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 LSSP48449 732 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 PPM1FP49593 454 aaPredicted RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 VPS41P49754 854 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 CLCNKAP51800 687 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 UBE2IP63279 158 aaKnown RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 C16orf72Q14CZ0 275 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 ZRANB3Q5FWF4 1079 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 C19orf48Q6RUI8 117 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 LINC00523Q86TU6 105 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 PIANPQ8IYJ0 282 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 RASGEF1CQ8N431 466 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 MAIP1Q8WWC4 291 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 LIN37Q96GY3 246 aaPredicted RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 CRELD1Q96HD1 420 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 CCDC74BQ96LY2 380 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 ZNF778Q96MU6 729 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 OSBPL9Q96SU4 736 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 TBC1D10AQ9BXI6 508 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 ZMYND15Q9H091 742 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 SARS2Q9NP81 518 aaKnown RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 CASS4Q9NQ75 786 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 ZNF624Q9P2J8 865 aaPredicted RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 CPNE7Q9UBL6 633 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 RALYQ9UKM9 306 aaKnown RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 DRG1Q9Y295 367 aaKnown RBP13.39□□□□□ -0.27
SNX3-204ENST00000426155 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 SLC30A1Q9Y6M5 507 aa13.39□□□□□ -0.27
SNX3-204ENST00000426155 CHD6Q8TD26 2715 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 KIR2DS5A0A0G2JLQ3 304 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 A0A0G2JNG1 304 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 IGHV5-10-1A0A0J9YXX1 117 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 TCRBV7S3A2A0A539 114 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 MROH6A6NGR9 719 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 KIR2DS3K7RE56 304 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 ETV5P41161 510 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 SLC19A1P41440 591 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 GPR3P46089 330 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 CRADDP78560 199 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 KIR2DS5Q14953 304 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 CLCA4Q14CN2 919 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 DUS1LQ6P1R4 473 aaKnown RBP13.38□□□□□ -0.27
SNX3-204ENST00000426155 ZNF534Q76KX8 674 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 RAB11FIP2Q7L804 512 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 SLC9B2Q86UD5 537 aa13.38□□□□□ -0.27
SNX3-204ENST00000426155 PIM3Q86V86 326 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms