RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 MCM3P25205 808 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 EPHA8P29322 1005 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-202ENST00000422991 STX2P32856 288 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 CCT8P50990 548 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 ATXN3P54252 364 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-202ENST00000422991 CTBP1Q13363 440 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 BCL7AQ4VC05 210 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 TEDDM1Q5T9Z0 273 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 CRTC3Q6UUV7 619 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 CYS1Q717R9 158 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 DET1Q7L5Y6 550 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 LRRTM4Q86VH4 590 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 TRAPPC5Q8IUR0 188 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 CLDN19Q8N6F1 224 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 C2CD4AQ8NCU7 369 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-202ENST00000422991 ZNF548Q8NEK5 533 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-202ENST00000422991 GABPB2Q8TAK5 448 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-202ENST00000422991 NAT14Q8WUY8 206 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 LPGAT1Q92604 370 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 SGF29Q96ES7 293 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 ZNF514Q96K75 400 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-202ENST00000422991 EDEM2Q9BV94 578 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 LRRC61Q9BV99 259 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 PARD6BQ9BYG5 372 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 RXFP3Q9NSD7 469 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 INTS10Q9NVR2 710 aaKnown RBP16.76■□□□□ 0.27
COL7A1-202ENST00000422991 SLC17A6Q9P2U8 582 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 ZNHIT2Q9UHR6 403 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 RAB21Q9UL25 225 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 GPR34Q9UPC5 381 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 VPS9D1Q9Y2B5 631 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 PRKAB1Q9Y478 270 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 PRSS21Q9Y6M0 314 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 CABIN1Q9Y6J0 2220 aa16.76■□□□□ 0.27
COL7A1-202ENST00000422991 FAM159BA6NKW6 160 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 OR2AG2A6NM03 316 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 PRMT5O14744 637 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 PFDN6O15212 129 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 PIAS2O75928 621 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 AP2A2O94973 939 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 F7P08709 466 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 ZNF7P17097 686 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 PRLHRP49683 370 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 MPP1Q00013 466 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 IL9RQ01113 521 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 PUM1Q14671 1186 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 RSPO4Q2I0M5 234 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 AASDHQ4L235 1098 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 PRRT3Q5FWE3 981 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 ZNF789Q5FWF6 425 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 TMEM220Q6QAJ8 160 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 KIAA0408Q6ZU52 694 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 KANSL1Q7Z3B3 1105 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 C11orf96Q7Z7L8 435 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 GALNT7Q86SF2 657 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 FBF1Q8TES7 1133 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 FUT8Q9BYC5 575 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 CLPBQ9H078 707 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 TMEM168Q9H0V1 697 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 P2RY12Q9H244 342 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 FBXO6Q9NRD1 293 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 SMYD2Q9NRG4 433 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 TM7SF3Q9NS93 570 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 DNAAF2Q9NVR5 837 aaKnown RBP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 TRNAU1APQ9NX07 287 aaKnown RBP16.75■□□□□ 0.27
COL7A1-202ENST00000422991 DLL3Q9NYJ7 618 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 ZFATQ9P243 1243 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 SPASTQ9UBP0 616 aa16.75■□□□□ 0.27
COL7A1-202ENST00000422991 UBA6A0AVT1 1052 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-202ENST00000422991 CDX4O14627 284 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-202ENST00000422991 KMOO15229 486 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 SDC3O75056 442 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 ACSL3O95573 720 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 TUBBP07437 444 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 CELA2BP08218 269 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-202ENST00000422991 ZNF883P0CG24 379 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 RPS3P23396 243 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL7A1-202ENST00000422991 PHBP35232 272 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 PMS2P54278 862 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 ADARP55265 1226 aaKnown RBP16.74■□□□□ 0.27
COL7A1-202ENST00000422991 LRP8Q14114 963 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 TRMT10CQ7L0Y3 403 aaKnown RBP16.74■□□□□ 0.27
COL7A1-202ENST00000422991 LRRC6Q86X45 466 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 FSTL5Q8N475 847 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-202ENST00000422991 AENQ8WTP8 325 aaKnown RBP16.74■□□□□ 0.27
COL7A1-202ENST00000422991 TIMM29Q9BSF4 260 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 TMEM9BQ9NQ34 198 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 GPSM3Q9Y4H4 160 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 ST14Q9Y5Y6 855 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 PSAT1Q9Y617 370 aa16.74■□□□□ 0.27
COL7A1-202ENST00000422991 CXorf49A8MYA2 514 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-202ENST00000422991 QSOX1O00391 747 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 AQP9O43315 295 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 PCDHGA12O60330 932 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 ABHD2P08910 425 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 ACP5P13686 325 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 CTSEP14091 401 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 DGKAP23743 735 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 GABRB3P28472 473 aa16.73■□□□□ 0.27
COL7A1-202ENST00000422991 LEPRP48357 1165 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms