RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 BLOC1S4Q9NUP1 217 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 POLG2Q9UHN1 485 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 CMAHPQ9Y471 501 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 OR2M5A3KFT3 312 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 AGAP14A8MT82 685 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 DVL1O14640 695 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 SYNCRIPO60506 623 aaKnown RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 GJB3O75712 270 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 PAK4O96013 591 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 AMBPP02760 352 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 HIST1H2ABP04908 130 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 RB1P06400 928 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 SRPRAP08240 638 aaKnown RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 HIST1H2ADP20671 130 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 PON1P27169 355 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 GLIPR1P48060 266 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 MMP14P50281 582 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 DVL1P1P54792 670 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 PPP2R2BQ00005 443 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 MBTD1Q05BQ5 628 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 RBM39Q14498 530 aaKnown RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 PLA2G4FQ68DD2 849 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 HIST3H2AQ7L7L0 130 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 TRMT1LQ7Z2T5 733 aaKnown RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 DNAAF4Q8WXU2 420 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 POMGNT1Q8WZA1 660 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZNF501Q96CX3 271 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 ST6GAL2Q96JF0 529 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 SEMA6AQ9H2E6 1030 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 FKRPQ9H9S5 495 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 EIF2B3Q9NR50 452 aaKnown RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 TRMT1Q9NXH9 659 aaKnown RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 RCC2Q9P258 522 aaKnown RBP4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 NENFQ9UMX5 172 aa4.2□□□□□ -1.74
HMGB1P49-201ENST00000418882 IGLV5-45A0A087WSX0 123 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 A0A0G2JNG1 304 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 TEX13DA0A0J9YY54 714 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 PTGES3LE9PB15 166 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 WDHD1O75717 1129 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 KRT19P08727 400 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 TMEM11P17152 192 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 MCCP23508 829 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 MMP15P51511 669 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 SUOXP51687 545 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 PRAMEP78395 509 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 LRMPQ12912 555 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 KIR2DS5Q14953 304 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 TMEM154Q6P9G4 183 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 AACSQ86V21 672 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 HACE1Q8IYU2 909 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 SCYL3Q8IZE3 742 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 METTL27Q8N6F8 245 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 C1orf52Q8N6N3 182 aaKnown RBP4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZNF524Q96C55 264 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 PGAM5Q96HS1 289 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 HES6Q96HZ4 224 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 C17orf77Q96MU5 243 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 DDOQ99489 341 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 HGH1Q9BTY7 390 aa4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 TFB2MQ9H5Q4 396 aaKnown RBP4.19□□□□□ -1.74
HMGB1P49-201ENST00000418882 CDRT15L2A8MXV6 281 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 PRKNO60260 465 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 LIPFP07098 398 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 CSF2RAP15509 400 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 PAX1P15863 534 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 HOXA13P31271 388 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 HOXA1P49639 335 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 CTSCP53634 463 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 ARF3P61204 181 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 ARF1P84077 181 aaKnown RBP4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 GAGE5Q13069 117 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 GAGE6Q13070 117 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 ACVR2BQ13705 512 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 CRYMQ14894 314 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 MEP1AQ16819 746 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 WDR38Q5JTN6 314 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 TPRG1Q6ZUI0 275 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 PLEKHM3Q6ZWE6 761 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 DGLUCYQ7Z3D6 616 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 TICAM1Q8IUC6 712 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 ADGRF2Q8IZF7 708 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZNF843Q8N446 348 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 FCAMRQ8WWV6 532 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZNF354BQ96LW1 612 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 SLC22A12Q96S37 553 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 RAD21L1Q9H4I0 556 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZHX3Q9H4I2 956 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 SLA2Q9H6Q3 261 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 DBNLQ9UJU6 430 aaKnown RBP4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 ITIH6Q6UXX5 1313 aa4.18□□□□□ -1.74
HMGB1P49-201ENST00000418882 AP3D1O14617 1153 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 VILLO15195 856 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZBTB43O43298 467 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 GPC4O75487 556 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 TFAP2AP05549 437 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 ACTN1P12814 892 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 MMP9P14780 707 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 NR2F2P24468 414 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 NMBRP28336 390 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 PRKAA1Q13131 559 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms