RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 HMGCLP35914 325 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 DLSTP36957 453 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 CASRP41180 1078 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 HALP42357 657 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 NR2C2P49116 596 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 SH3BP2P78314 561 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 TMEM115Q12893 351 aaPredicted RBP14.18□□□□□ -0.14
PAF1-202ENST00000416728 TFDP2Q14188 446 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 GPR18Q14330 331 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 PRKD1Q15139 912 aaPredicted RBP14.18□□□□□ -0.14
PAF1-202ENST00000416728 ATP1A1-AS1Q5TC04 95 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 CACHD1Q5VU97 1274 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 ZDHHC20Q5W0Z9 365 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 MFSD7Q6UXD7 560 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 PRSS42Q7Z5A4 293 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 RASGRP3Q8IV61 690 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 GALNT6Q8NCL4 622 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 BRSK1Q8TDC3 778 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 TFB1MQ8WVM0 346 aaKnown RBP14.18□□□□□ -0.14
PAF1-202ENST00000416728 RNF31Q96EP0 1072 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 STAMBPL1Q96FJ0 436 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 ZDHHC12Q96GR4 267 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 CHP1Q99653 195 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 ZCCHC2Q9C0B9 1178 aaKnown RBP14.18□□□□□ -0.14
PAF1-202ENST00000416728 NHEJ1Q9H9Q4 299 aaPredicted RBP14.18□□□□□ -0.14
PAF1-202ENST00000416728 ABHD10Q9NUJ1 306 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 FAM153AQ9UHL3 310 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 HYOU1Q9Y4L1 999 aa14.18□□□□□ -0.14
PAF1-202ENST00000416728 MRPS18BQ9Y676 258 aaKnown RBP14.18□□□□□ -0.14
PAF1-202ENST00000416728 SPOPO43791 374 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 KIF1CO43896 1103 aaKnown RBP14.17□□□□□ -0.14
PAF1-202ENST00000416728 KIAA0754O94854 1291 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 NDUFA10O95299 355 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 F8A1P23610 371 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 WNT3AP56704 352 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 NOMO1Q15155 1222 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 IRGCQ6NXR0 463 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 CYB5D1Q6P9G0 228 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 FAM92BQ6ZTR7 304 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 C11orf96Q7Z7L8 435 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 ABHD17AQ96GS6 310 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 ELMO2Q96JJ3 720 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 IL26Q9NPH9 171 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 KLHL8Q9P2G9 620 aaPredicted RBP14.17□□□□□ -0.14
PAF1-202ENST00000416728 SAE1Q9UBE0 346 aaPredicted RBP14.17□□□□□ -0.14
PAF1-202ENST00000416728 EPHA6Q9UF33 1036 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 LNPEPQ9UIQ6 1025 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 CROTQ9UKG9 612 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 KCTD3Q9Y597 815 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 BSNQ9UPA5 3926 aa14.17□□□□□ -0.14
PAF1-202ENST00000416728 LOC285095A0A1B0GVY8 99 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 CYSRT1A8MQ03 144 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 MTSS1O43312 755 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 CST8O60676 142 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 KCNJ13O60928 360 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 MFAP3LO75121 409 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 EPOP01588 193 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 PECAM1P16284 738 aaPredicted RBP14.16□□□□□ -0.14
PAF1-202ENST00000416728 NFKB1P19838 968 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 COMTP21964 271 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 CD68P34810 354 aaPredicted RBP14.16□□□□□ -0.14
PAF1-202ENST00000416728 SPAM1P38567 509 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 CDKN2BP42772 138 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 WASHC5Q12768 1159 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 PPP2R5EQ16537 467 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 LACTB2Q53H82 288 aaPredicted RBP14.16□□□□□ -0.14
PAF1-202ENST00000416728 SIRPB2Q5JXA9 342 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 KAZNQ674X7 775 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 KDELC1Q6UW63 502 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 FAM151BQ6UXP7 276 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 AMZ2Q86W34 360 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 PPP1R3BQ86XI6 285 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 TTC30BQ8N4P2 665 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 SLC25A41Q8N5S1 370 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 KLHL6Q8WZ60 621 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 RAB33BQ9H082 229 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.16□□□□□ -0.14
PAF1-202ENST00000416728 HACD3Q9P035 362 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 KCND3Q9UK17 655 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 WDR37Q9Y2I8 494 aa14.16□□□□□ -0.14
PAF1-202ENST00000416728 HECTD1Q9ULT8 2610 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 F5H423 210 aaPredicted RBP14.15□□□□□ -0.14
PAF1-202ENST00000416728 KATNA1O75449 491 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 SPAG6O75602 509 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 CCNYL3P0C7X3 344 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 FGF5P12034 268 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 NELFEP18615 380 aaKnown RBP14.15□□□□□ -0.14
PAF1-202ENST00000416728 CHRNA4P43681 627 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 DMPKQ09013 629 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 ERV3-1Q14264 604 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 LLGL1Q15334 1064 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 CHRNA6Q15825 494 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 TAZQ16635 292 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.15□□□□□ -0.14
PAF1-202ENST00000416728 LDLRAP1Q5SW96 308 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 KLHL35Q6PF15 583 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 GLT6D1Q7Z4J2 308 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 VSTM4Q8IW00 320 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 DTX3LQ8TDB6 740 aa14.15□□□□□ -0.14
PAF1-202ENST00000416728 BLOC1S5Q8TDH9 187 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms