RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TEX37Q96LM6 180 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 MCMBPQ9BTE3 642 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 NSMCE4AQ9NXX6 385 aa14.58□□□□□ -0.08
NCKIPSD-204ENST00000416649 H3BRB1 525 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 UPK1AO00322 258 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 AP3D1O14617 1153 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 TEX28O15482 410 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 CST1P01037 141 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 CD4P01730 458 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 CPB1P15086 417 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 NPY2RP49146 381 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 ST13P50502 369 aaKnown RBP14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 CLCNKBP51801 687 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 TRAF3Q13114 568 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 NPTX1Q15818 432 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 TECRLQ5HYJ1 363 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 AGAP9Q5VTM2 703 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 IER5Q5VY09 327 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 IPMKQ8NFU5 416 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 TWIST2Q8WVJ9 160 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 PPM1MQ96MI6 270 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 GSTO2Q9H4Y5 243 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZBTB20Q9HC78 741 aaPredicted RBP14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF639Q9UID6 485 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 INTS6Q9UL03 887 aaKnown RBP14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 ISPDA4D126 451 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 PGLSO95336 258 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 APOA1P02647 267 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 SLC4A1P02730 911 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 MYCLP1P12525 358 aaPredicted RBP14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 POLD2P49005 469 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 ARPP19P56211 112 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 MTPNP58546 118 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 CHRNEQ04844 493 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 CDH17Q12864 832 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 EPS8Q12929 822 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF792Q3KQV3 632 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF789Q5FWF6 425 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 LAIR2Q6ISS4 152 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 TRAF7Q6Q0C0 670 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 FAM20CQ8IXL6 584 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 FAM167AQ96KS9 214 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 MBOAT4Q96T53 435 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 DCSTAMPQ9H295 470 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 IGSF5Q9NSI5 407 aa14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 TRMT13Q9NUP7 481 aaKnown RBP14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 EIF3LQ9Y262 564 aaKnown RBP14.57□□□□□ -0.08
NCKIPSD-204ENST00000416649 LOC100130705A0A1B0GUX0 176 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 LOC105371267A0A1B0GV96 52 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 EFCAB9A8MZ26 197 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 PPEF2O14830 753 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 CRCPO75575 148 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 P2RX3P56373 397 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 SH3BP2P78314 561 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 BEX3Q00994 111 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 FAM98BQ52LJ0 330 aaKnown RBP14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 AGAP6Q5VW22 663 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 SULT1C3Q6IMI6 304 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 GDPD3Q7L5L3 318 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 DEFB106AQ8N104 65 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 FAM86B1Q8N7N1 296 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 AURKBQ96GD4 344 aaPredicted RBP14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 AGAP4Q96P64 663 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 CDT1Q9H211 546 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 WDR6Q9NNW5 1121 aaKnown RBP14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF487B1APH4 448 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 UBXN8O00124 270 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 MT-CYBP00156 380 aaPredicted RBP14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 NTRK1P04629 796 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 CD36P16671 472 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 ARNTP27540 789 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 GABARAPL2P60520 117 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 GALK2Q01415 458 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 SIM2Q14190 667 aaPredicted RBP14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 CLCA4Q14CN2 919 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 LACC1Q8IV20 430 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 CLYBLQ8N0X4 340 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 NATD1Q8N6N6 113 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 OR6J1Q8NGC5 347 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 BPIFB1Q8TDL5 484 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 HCAR2Q8TDS4 363 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 CCDC126Q96EE4 140 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 BTBD2Q9BX70 525 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 TRIM54Q9BYV2 358 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 CYP3A43Q9HB55 503 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 UTS2RQ9UKP6 389 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 FZD10Q9ULW2 581 aa14.56□□□□□ -0.08
NCKIPSD-204ENST00000416649 FAM72CH0Y354 149 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 CNTN5O94779 1100 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ERCC2P18074 760 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 SLC26A2P50443 739 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 ZNF404Q494X3 552 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 FAM72AQ5TYM5 149 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 SLX4IPQ5VYV7 408 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 FAM72DQ6L9T8 149 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 BEND5Q7L4P6 421 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 FAM72BQ86X60 149 aa14.55□□□□□ -0.08
NCKIPSD-204ENST00000416649 NLGN4XQ8N0W4 816 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms