RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 LRRC6Q86X45 466 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 RBM12BQ8IXT5 1001 aaKnown RBP14.42□□□□□ -0.1
LIMS1-206ENST00000414829 LMNTD2Q8IXW0 634 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 CACTIN-AS1Q8N1I8 211 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 RASGEF1AQ8N9B8 481 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 CCL4L1Q8NHW4 92 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 GRAMD1AQ96CP6 724 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 WASH6PQ9NQA3 447 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 CHRAC1Q9NRG0 131 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 KLC4Q9NSK0 619 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.42□□□□□ -0.1
LIMS1-206ENST00000414829 ANGPTL2Q9UKU9 493 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 PRKAB1Q9Y478 270 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 MAD1L1Q9Y6D9 718 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 TMEM131Q92545 1883 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 DOCK9Q9BZ29 2069 aa14.42□□□□□ -0.1
LIMS1-206ENST00000414829 CNOT1A5YKK6 2376 aaKnown RBP14.41□□□□□ -0.1
LIMS1-206ENST00000414829 DNAH14Q0VDD8 3507 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 LY6G6EA0A0G2JKS1 128 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 C17orf113A0A1B0GUU1 675 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 CCDC78A2IDD5 438 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 MGAT4DA6NG13 374 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 OR2AG2A6NM03 316 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 PDZK1P1A8MUH7 402 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 GOLGA8MH3BSY2 632 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 CCL22O00626 93 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 USP1O94782 785 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 POLBP06746 335 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 OR56A5P0C7T3 313 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 GPR3P46089 330 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 FASLGP48023 281 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 TERF1P54274 439 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 ARL4CP56559 192 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 CRADDP78560 199 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 PLOD1Q02809 727 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-206ENST00000414829 FOXC1Q12948 553 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 SMAD1Q15797 465 aaKnown RBP14.41□□□□□ -0.1
LIMS1-206ENST00000414829 DBN1Q16643 649 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 HIF1AQ16665 826 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 FNBP1LQ5T0N5 605 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 ZNF648Q5T619 568 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-206ENST00000414829 TMEM220Q6QAJ8 160 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 CAND1Q86VP6 1230 aaKnown RBP14.41□□□□□ -0.1
LIMS1-206ENST00000414829 C17orf82Q86X59 251 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-206ENST00000414829 ZNF547Q8IVP9 402 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 SFRP1Q8N474 314 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 OTUD6BQ8N6M0 293 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 HM13Q8TCT9 377 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 CALML6Q8TD86 181 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 STAMBPL1Q96FJ0 436 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 TCF12Q99081 682 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.41□□□□□ -0.1
LIMS1-206ENST00000414829 EPB41L1Q9H4G0 881 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 SPATS2LQ9NUQ6 558 aaKnown RBP14.41□□□□□ -0.1
LIMS1-206ENST00000414829 WHRNQ9P202 907 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 SLC2A6Q9UGQ3 507 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 ACSL5Q9ULC5 683 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 U3KQA8 63 aa14.41□□□□□ -0.1
LIMS1-206ENST00000414829 TP53BP1Q12888 1972 aaPredicted RBP14.4□□□□□ -0.1
LIMS1-206ENST00000414829 POP7O75817 140 aaKnown RBP14.4□□□□□ -0.1
LIMS1-206ENST00000414829 PGAM1P18669 254 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 OGNP20774 298 aaKnown RBP14.4□□□□□ -0.1
LIMS1-206ENST00000414829 CTSCP53634 463 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 CAV1Q03135 178 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 C2orf54Q08AI8 447 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 PLA2G4EQ3MJ16 856 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 HIBCHQ6NVY1 386 aaPredicted RBP14.4□□□□□ -0.1
LIMS1-206ENST00000414829 C8orf74Q6P047 294 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 DHRS13Q6UX07 377 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 DET1Q7L5Y6 550 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 ZNF438Q7Z4V0 828 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 TMEM135Q86UB9 458 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 SLCO6A1Q86UG4 719 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 TRIM48Q8IWZ4 208 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 PIANPQ8IYJ0 282 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 OR2L2Q8NH16 312 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 CCDC74AQ96AQ1 378 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 ZNF778Q96MU6 729 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 DEPDC7Q96QD5 511 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 DPYSL5Q9BPU6 564 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 ERP44Q9BS26 406 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 TRIM51Q9BSJ1 452 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 CCM2Q9BSQ5 444 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 SARS2Q9NP81 518 aaKnown RBP14.4□□□□□ -0.1
LIMS1-206ENST00000414829 POT1Q9NUX5 634 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 LRIT1Q9P2V4 623 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 TBC1D29Q9UFV1 150 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 DNAJC16Q9Y2G8 782 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 NEUROG3Q9Y4Z2 214 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 MRFAP1Q9Y605 127 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 RPS6KL1Q9Y6S9 549 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 CACNA1AO00555 2505 aa14.4□□□□□ -0.1
LIMS1-206ENST00000414829 SPTBN4Q9H254 2564 aa14.39□□□□□ -0.11
LIMS1-206ENST00000414829 CTAGE15A4D2H0 777 aa14.39□□□□□ -0.11
LIMS1-206ENST00000414829 A6NCN8 305 aa14.39□□□□□ -0.11
LIMS1-206ENST00000414829 H3BMM5 538 aa14.39□□□□□ -0.11
LIMS1-206ENST00000414829 TMX2-CTNND1H3BSU7 103 aa14.39□□□□□ -0.11
LIMS1-206ENST00000414829 CD3EAPO15446 510 aaKnown RBP14.39□□□□□ -0.11
LIMS1-206ENST00000414829 OPA1O60313 960 aa14.39□□□□□ -0.11
LIMS1-206ENST00000414829 SNX2O60749 519 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms