RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 CAPN6Q9Y6Q1 641 aa3.93□□□□□ -1.78
LINC01048-201ENST00000414480 SMCHD1A6NHR9 2005 aa3.93□□□□□ -1.78
LINC01048-201ENST00000414480 DMXL1Q9Y485 3027 aa3.93□□□□□ -1.78
LINC01048-201ENST00000414480 FAM208BQ5VWN6 2430 aa3.93□□□□□ -1.78
LINC01048-201ENST00000414480 VPS13AQ96RL7 3174 aa3.93□□□□□ -1.78
LINC01048-201ENST00000414480 DOCK2Q92608 1830 aa3.93□□□□□ -1.78
LINC01048-201ENST00000414480 MAST3O60307 1309 aa3.93□□□□□ -1.78
LINC01048-201ENST00000414480 ATXN2Q99700 1313 aaKnown RBP3.93□□□□□ -1.78
LINC01048-201ENST00000414480 COL4A4P53420 1690 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 FUOMA2VDF0 154 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ANKRD34BA5PLL1 514 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 URADA6NGE7 173 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ZNF891A8MT65 544 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 C12orf71A8MTZ7 269 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 A8MXE2 369 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SUPT3HB4E1H0 165 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 PRR23D1E9PI22 279 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 H3BQ06 376 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 DNALI1O14645 258 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ZNF197O14709 1029 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 B4GAT1O43505 415 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 HCRTR2O43614 444 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 GAS7O60861 476 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SEMA7AO75326 666 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SCGB2A1O75556 95 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CRCPO75575 148 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CBR3O75828 277 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 TMEM63AO94886 807 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CDK14O94921 469 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CCNB2O95067 398 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 PCDH8O95206 1070 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SNAP29O95721 258 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SCGB1D1O95968 90 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 MBP02144 154 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 KRT8P05787 483 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CHRM5P08912 532 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 GNAO1P09471 354 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 LINGO3P0C6S8 592 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ZNF888P0CJ79 500 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 PRR23D2P0DMB1 279 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 NR2F1P10589 423 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 LCP1P13796 627 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 BPIP17213 487 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 TCP1P17987 556 aaKnown RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 BMP7P18075 431 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CYP2A7P20853 494 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SYT1P21579 422 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 HNRNPA2B1P22626 353 aaKnown RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SP100P23497 879 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 AKAP5P24588 427 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CCNE1P24864 410 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CD1BP29016 333 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 PCSK1P29120 753 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ADORA2AP29274 412 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 PRDX5P30044 214 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 AVPR2P30518 371 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 CAPGP40121 348 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 TMPOP42166 694 aaKnown RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SYKP43405 635 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 GSTM5P46439 218 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 PPP3CCP48454 512 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 HSPA7P48741 367 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 HARS2P49590 506 aaKnown RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ZNF165P49910 485 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 GNG10P50151 68 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SERPINB9P50453 376 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 BCAP31P51572 246 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 EIF3BP55884 814 aaKnown RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SELENOVP59797 346 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SRP54P61011 504 aaKnown RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ACTR3P61158 418 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 MAT1AQ00266 395 aaKnown RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 AMPD2Q01433 879 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 PLOD1Q02809 727 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SCN1BQ07699 218 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 MERTKQ12866 999 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 TRAF2Q12933 501 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 STX3Q13277 289 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 PMS2P3Q13401 168 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 TRA2AQ13595 282 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 FAM189A2Q15884 450 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SSX2Q16385 188 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 DGKDQ16760 1214 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ST3GAL2Q16842 350 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 FAM83EQ2M2I3 478 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 MYLK3Q32MK0 819 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 UAP1L1Q3KQV9 507 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 SLC9B1Q4ZJI4 515 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 MPP7Q5T2T1 576 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 METTL21CQ5VZV1 264 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 STEAP3Q658P3 488 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 ANKS6Q68DC2 871 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 KRT80Q6KB66 452 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 KIAA1841Q6NSI8 718 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 KIAA1161Q6NSJ0 714 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 TTC33Q6PID6 262 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 TRAT1Q6PIZ9 186 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 VHLLQ6RSH7 139 aa3.92□□□□□ -1.78
LINC01048-201ENST00000414480 METAP1DQ6UB28 335 aaPredicted RBP3.92□□□□□ -1.78
LINC01048-201ENST00000414480 NPNTQ6UXI9 565 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms