RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-229	ENST00000411527	C21orf140	B9A014	251 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PROSC	O94903	275 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SERPINC1	P01008	464 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SERPING1	P05155	500 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	FOLR1	P15328	257 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	BPI	P17213	487 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	VCL	P18206	1134 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	GNLY	P22749	145 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PPP1CA	P62136	330 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	IFI35	P80217	286 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PPID	Q08752	370 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	AP1B1	Q10567	949 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	TUBB3	Q13509	450 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	KCNAB1	Q14722	419 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PCSK7	Q16549	785 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PWWP2B	Q6NUJ5	590 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	ALKBH5	Q6P6C2	394 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	NT5DC3	Q86UY8	548 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CPT1C	Q8TCG5	803 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SYN2	Q92777	582 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	RNF157	Q96PX1	679 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	RUFY1	Q96T51	708 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CTTNBP2NL	Q9P2B4	639 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	TMPRSS11E	Q9UL52	423 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	WDR37	Q9Y2I8	494 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	HEY1	Q9Y5J3	304 aa		13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	UTP20	O75691	2785 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	ICE1	Q9Y2F5	2266 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	KDELR1	P24390	212 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	HAL	P42357	657 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	RPS18	P62269	152 aa	Known RBP	13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CDK18	Q07002	472 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	TMEM115	Q12893	351 aa	Predicted RBP	13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	FHL5	Q5TD97	284 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CCDC70	Q6NSX1	233 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	C11orf96	Q7Z7L8	435 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	TRAPPC5	Q8IUR0	188 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	GALNT11	Q8NCW6	608 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	GDAP1	Q8TB36	358 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CPLX3	Q8WVH0	158 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SEC14L1	Q92503	715 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	RAPGEF5	Q92565	580 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	UBXN4	Q92575	508 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	IMP4	Q96G21	291 aa	Known RBP	13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SLC41A2	Q96JW4	573 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	TTC25	Q96NG3	672 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	AGAP3	Q96P47	875 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	FCRL4	Q96PJ5	515 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	GPR87	Q9BY21	358 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	BPIFA1	Q9NP55	256 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SEMA5B	Q9P283	1151 aa		13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	USP9X	Q93008	2570 aa	Predicted RBP	13.97	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527		A0A1W2PQJ5	194 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	GOLGA6L22	H0YM25	854 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	AURKA	O14965	403 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	EBLN1	P0CF75	366 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	FECH	P22830	423 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PTPN4	P29074	926 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	ARL4D	P49703	201 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CCL11	P51671	97 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PGD	P52209	483 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	RPS15	P62841	145 aa	Known RBP	13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CHAF1B	Q13112	559 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	GTF2H3	Q13889	308 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	UGT8	Q16880	541 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	NADK2	Q4G0N4	442 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	ATP13A5	Q4VNC0	1218 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	KLHL35	Q6PF15	583 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CERS6	Q6ZMG9	384 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	BPHL	Q86WA6	291 aa	Predicted RBP	13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PLD5	Q8N7P1	536 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	THAP4	Q8WY91	577 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	VPS35	Q96QK1	796 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	MAP3K3	Q99759	626 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SLC25A23	Q9BV35	468 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SLC25A51	Q9H1U9	297 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	CBX8	Q9HC52	389 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	PSMD13	Q9UNM6	376 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SPO11	Q9Y5K1	396 aa		13.96	□□□□□ -0.17
HLA-DQB2-229	ENST00000411527	SPEN	Q96T58	3664 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	ARGFX	A6NJG6	315 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	KCNJ13	O60928	360 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	NDST3	O95803	873 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	MBD3	O95983	291 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	MT-CYB	P00156	380 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	PDE1B	Q01064	536 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	ACY1	Q03154	408 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	RPE65	Q16518	533 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	CPZ	Q66K79	652 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	AMZ2	Q86W34	360 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	GPR150	Q8NGU9	434 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SPATA22	Q8NHS9	363 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	BRSK1	Q8TDC3	778 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	TADA1	Q96BN2	335 aa		13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	ZNF514	Q96K75	400 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	SRPK1	Q96SB4	655 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DQB2-229	ENST00000411527	XPO4	Q9C0E2	1151 aa	Known RBP	13.95	□□□□□ -0.18

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