RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 C8BP07358 591 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 CDH1P12830 882 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 ATP5F1P24539 256 aaPredicted RBP12.84□□□□□ -0.35
PTPRN-202ENST00000409251 DCKP27707 260 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 LHX1P48742 406 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 DAOAP59103 153 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 CHRNB3Q05901 458 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 VAC14Q08AM6 782 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 SELENBP1Q13228 472 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 TUSC3Q13454 348 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 CTXN3Q4LDR2 81 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 FRA10AC1Q70Z53 315 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 MCFD2Q8NI22 146 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 ITFG1Q8TB96 612 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 RHNO1Q9BSD3 238 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 SEZ6LQ9BYH1 1024 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 ATP13A3Q9H7F0 1226 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 CMTM6Q9NX76 183 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 HACD3Q9P035 362 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.84□□□□□ -0.35
PTPRN-202ENST00000409251 UGT2A1Q9Y4X1 527 aa12.84□□□□□ -0.35
PTPRN-202ENST00000409251 DNMT3AQ9Y6K1 912 aaPredicted RBP12.84□□□□□ -0.35
PTPRN-202ENST00000409251 A8MT66 165 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 H0Y626 953 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 PGLSO95336 258 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 TRIM16O95361 564 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 SBK3P0C264 359 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 PIK3CGP48736 1102 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 SLC36A3Q495N2 470 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 UGT3A1Q6NUS8 523 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 CDC26Q8NHZ8 85 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 HMGCLL1Q8TB92 370 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 FAR1Q8WVX9 515 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 NECTIN4Q96NY8 510 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 ZNF347Q96SE7 839 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 TTYH2Q9BSA4 534 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 CCM2LQ9NUG4 571 aaPredicted RBP12.83□□□□□ -0.35
PTPRN-202ENST00000409251 NDFIP2Q9NV92 336 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 C14orf119Q9NWQ9 140 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 PDE10AQ9Y233 779 aa12.83□□□□□ -0.35
PTPRN-202ENST00000409251 KATNA1O75449 491 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 THRBP10828 461 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 IDO1P14902 403 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 WARSP23381 471 aaKnown RBP12.83□□□□□ -0.36
PTPRN-202ENST00000409251 HOXD10P28358 340 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 NOS2P35228 1153 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 MAGEA3P43357 314 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 TAZQ16635 292 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 GLYATQ6IB77 296 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 THEM5Q8N1Q8 247 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 ST13P5Q8NFI4 369 aaPredicted RBP12.83□□□□□ -0.36
PTPRN-202ENST00000409251 SMARCD1Q96GM5 515 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 NODALQ96S42 347 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 NMUR1Q9HB89 426 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 ADPRHL2Q9NX46 363 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 FBXO5Q9UKT4 447 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 PCDHGA8Q9Y5G5 932 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 A0A1W2PQH9 124 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 TCRBV3S1A0A5B6 114 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 ALDH1A2O94788 518 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 IPO13O94829 963 aaKnown RBP12.83□□□□□ -0.36
PTPRN-202ENST00000409251 ALDH1A1P00352 501 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 CST1P01037 141 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 DNTTP04053 509 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 ACADSBP45954 432 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 SERPINB10P48595 397 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 TP53BP2Q13625 1128 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 RBBP7Q16576 425 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 TAS1R1Q7RTX1 841 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 THAP5Q7Z6K1 395 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 NPWQ8N729 165 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 TRPV3Q8NET8 790 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 STYXQ8WUJ0 223 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 OSBPL10Q9BXB5 764 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 ASPSCR1Q9BZE9 553 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 TRIT1Q9H3H1 467 aaKnown RBP12.83□□□□□ -0.36
PTPRN-202ENST00000409251 PARVBQ9HBI1 364 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 NEK6Q9HC98 313 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 ERVK-11Q9UQG0 969 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 Q9Y3F1 56 aa12.83□□□□□ -0.36
PTPRN-202ENST00000409251 AXIN1O15169 862 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 NDUFS2O75306 463 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 H2AFYO75367 372 aaKnown RBP12.82□□□□□ -0.36
PTPRN-202ENST00000409251 TOMM70O94826 608 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 ALDOCP09972 364 aaKnown RBP12.82□□□□□ -0.36
PTPRN-202ENST00000409251 MBL2P11226 248 aaPredicted RBP12.82□□□□□ -0.36
PTPRN-202ENST00000409251 BMP4P12644 408 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 TCF3P15923 654 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 ADRA1BP35368 520 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 NR2C2P49116 596 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 ACADVLP49748 655 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 DUSP4Q13115 394 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 PTPRCAPQ14761 206 aa12.82□□□□□ -0.36
PTPRN-202ENST00000409251 TAB1Q15750 504 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms